Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0849 |
Symbol | lacA |
ID | 4185751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 973454 |
End bp | 974107 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070851 |
Product | thiogalactoside acetyltransferase |
Protein accession | YP_677472 |
Protein GI | 110637265 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.148081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.207247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTGC GGATAGCAAA TAAAATATTG AAACGTTTGG CTGGAGTACA GGTTATTCCT GTAAATAAAA AGCGTTTATC TGTTTTAGAT AATAAGCATC TGCATATTGC CTCCAATTCA ATCTTGCTGG AAGGTACGTC ATTGGATTTC AGACAGGAAA TTTCTTCTTC CGATACGTAT GTTTCTATTG GCGGGTATTG CCTGATCAAA GCTATCTTCA CATTTGAAAC AACTACAGGA TTAATAACCA TAGGTAATAA TGTTCATATT GGAAATGCAC ATTTTATATG CCGGTCCGCC ATTACGATTC ATGATGATGT AACAATGGCG TGGGGTATTA CCTTATACGA TCATAATTCA CATAGCATTC ATTGGGAAGA ACGGAAGGAT GATAATAAAA CCTGTTACGA AGATTTTGTT CAGCATCATG GAAATAATAT CGTTAATAAA AACTGGATAA ACGTTCTTTC CAGGCCCATA GTAATTGAAT CTAAAGCCTG GATAGGTTTT AATGTAACAA TATTAAAAGG CGTAACTATA GGTGAAGGCG CAGTGATAGG AGCCTGCAGC GTTGTGACAA AAGACGTTCC CGCGTGGACA GTTGTTGCCG GAAACCCGGC TGCTGTTGTA AAACATTTAC AAAAACCGGA ATGA
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Protein sequence | MFLRIANKIL KRLAGVQVIP VNKKRLSVLD NKHLHIASNS ILLEGTSLDF RQEISSSDTY VSIGGYCLIK AIFTFETTTG LITIGNNVHI GNAHFICRSA ITIHDDVTMA WGITLYDHNS HSIHWEERKD DNKTCYEDFV QHHGNNIVNK NWINVLSRPI VIESKAWIGF NVTILKGVTI GEGAVIGACS VVTKDVPAWT VVAGNPAAVV KHLQKPE
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