Gene CHU_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0845 
Symbolwza 
ID4185747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp968078 
End bp968839 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content36% 
IMG OID638070847 
Productpolysaccharide export protein 
Protein accessionYP_677468 
Protein GI110637261 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.700264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATC GTACTTCATT ATATATAAAA TTTCTTATCG GTTCTTTTTT ATTGCTGGCG 
GGTTCATGTA TAGGGTATAA AAAGACGTTA TACTTTCAAG GTGCAGCGGA AACATTGCCG
CCACCAAAGC TAACACAAAC ATATACGTTA CGGGTACACG ACATTGTTCA GATTAAAATC
GCAAATCCGG ATGCCGAAAA TCCCGCAGTA TTATCCGGAG AACAAGGCAA CATCCAATCT
AACGTTGCGG ATGCGTATTT TAGAGATTAT TATATCAATG ATTCGGGCTA TGTTGAACTG
CCGGTTATAG GCAAACTAAA ACTTGTTGGT TACACCATTT TTCAGGCTGA TTCATTAATA
GCGAAAAAGG CTGTTGAATA TTACAGCAAT GTTACTGTAG AAGTTAAATT AGCTTCGTTT
AAATTCATGG CACTTGGAGA ATTTACAAAA GCAGGCCTTT GTTTTGTATC CAATGAAACA
TGTACCATTT ATGAAGCAAT AGCAATTGCC GGAGATGCTA CCGATTTTGC GAATAATCAA
AAGCTGCAGC TTATACGAAC GTTAGAAGAT GGAAGTAAAA AAATTTATCA TATAAACCTG
ACAGATTATT CTTCCTTTAC TTCCGATAAT TATTACCTGC AGCCAAACGA TATCCTGTAT
CTGCAGGCAC AAAAAGCAAA AGTTGACAAG CAAAACATAA CCTATATATC GATTGCATTG
TCTGCAGCAT CATTTATACT ATTGCTTTTA ACAAGAATTT AA
 
Protein sequence
MNNRTSLYIK FLIGSFLLLA GSCIGYKKTL YFQGAAETLP PPKLTQTYTL RVHDIVQIKI 
ANPDAENPAV LSGEQGNIQS NVADAYFRDY YINDSGYVEL PVIGKLKLVG YTIFQADSLI
AKKAVEYYSN VTVEVKLASF KFMALGEFTK AGLCFVSNET CTIYEAIAIA GDATDFANNQ
KLQLIRTLED GSKKIYHINL TDYSSFTSDN YYLQPNDILY LQAQKAKVDK QNITYISIAL
SAASFILLLL TRI