Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0845 |
Symbol | wza |
ID | 4185747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 968078 |
End bp | 968839 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638070847 |
Product | polysaccharide export protein |
Protein accession | YP_677468 |
Protein GI | 110637261 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.700264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATC GTACTTCATT ATATATAAAA TTTCTTATCG GTTCTTTTTT ATTGCTGGCG GGTTCATGTA TAGGGTATAA AAAGACGTTA TACTTTCAAG GTGCAGCGGA AACATTGCCG CCACCAAAGC TAACACAAAC ATATACGTTA CGGGTACACG ACATTGTTCA GATTAAAATC GCAAATCCGG ATGCCGAAAA TCCCGCAGTA TTATCCGGAG AACAAGGCAA CATCCAATCT AACGTTGCGG ATGCGTATTT TAGAGATTAT TATATCAATG ATTCGGGCTA TGTTGAACTG CCGGTTATAG GCAAACTAAA ACTTGTTGGT TACACCATTT TTCAGGCTGA TTCATTAATA GCGAAAAAGG CTGTTGAATA TTACAGCAAT GTTACTGTAG AAGTTAAATT AGCTTCGTTT AAATTCATGG CACTTGGAGA ATTTACAAAA GCAGGCCTTT GTTTTGTATC CAATGAAACA TGTACCATTT ATGAAGCAAT AGCAATTGCC GGAGATGCTA CCGATTTTGC GAATAATCAA AAGCTGCAGC TTATACGAAC GTTAGAAGAT GGAAGTAAAA AAATTTATCA TATAAACCTG ACAGATTATT CTTCCTTTAC TTCCGATAAT TATTACCTGC AGCCAAACGA TATCCTGTAT CTGCAGGCAC AAAAAGCAAA AGTTGACAAG CAAAACATAA CCTATATATC GATTGCATTG TCTGCAGCAT CATTTATACT ATTGCTTTTA ACAAGAATTT AA
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Protein sequence | MNNRTSLYIK FLIGSFLLLA GSCIGYKKTL YFQGAAETLP PPKLTQTYTL RVHDIVQIKI ANPDAENPAV LSGEQGNIQS NVADAYFRDY YINDSGYVEL PVIGKLKLVG YTIFQADSLI AKKAVEYYSN VTVEVKLASF KFMALGEFTK AGLCFVSNET CTIYEAIAIA GDATDFANNQ KLQLIRTLED GSKKIYHINL TDYSSFTSDN YYLQPNDILY LQAQKAKVDK QNITYISIAL SAASFILLLL TRI
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