| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0837 |
|---|
| Symbol | |
|---|
| ID | 4185741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 947511 |
|---|
| End bp | 951065 |
|---|
| Gene Length | 3555 bp |
|---|
| Protein Length | 1184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638070841 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677462 |
|---|
| Protein GI | 110637255 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TTTTACGAAT AAAAATTGAA AATGAGAATC TGATTGCTGA TCACACTTTT
GACAAAGTAA AAAAACGGAA ACAGGAATAT TTCAACTTAA CTTTCTGTAC AGGTAAAATT
AAAGCCGTGG CTTTATCTAT GCTTTTCTTT CTTTTACTAA GTTATTCAGG GCATGCAGCT
GTAAAAACTT CTGCAGCTGC CGGTAACTGG AATGTCGCTG CAAACTGGAC ATCTTCGGGA
GTTCCAGGCA GTACAGATCA GGTTACTGTA AATAACATAA TGACATTAAA TGCGGATTTA
ACAATAAACA GCGGCGGCAT TTATACCTTT AATTCAAACT CCACCGGTAC AATGGTTTTG
AAAATGGGGG ATCATCTGTT AACAGGAGGA GGTGATCTGA ATATCAATGC GCCTGCAGTT
GTAACAATGG GGAGCGGTGA TTTGTATTTT GGAACAATAC ATGTGTATGC AGGAGCCACA
CTAAACATTA CAGGCAATTT AGATATTACA GCTTCAAATA TTATTGTTGA TGAAGGAGGT
ATATTAAATG TTGGCGGAAA CTTTTTAAAT ACAAACAGCA GTGTTGTTGT GAATGGTATC
ATTGCCATAG GCGGAAAGTA TGTATCGAAT GCAACAGCTT TAGCAAGTGC AACGGTTACA
GGTACGGGAA GTATTACCAG TAATGGTGTA ATGACCAACA GTACATTTTT GGGTTCAAGT
ACCATCTTTG GTTCATCCGG TGATTGCAAT GCCGGGCCGT GCAACGGCGG GTGCATTGCC
GGCATGACCG CGCTGCCTGT AACCGGCCCG GGAATGATCT GTTCGGGCAC ATCCAATCTG
GTATATACAA CAAATCCGGT AAGCGGTGCA AGCAGCTACG TATGGACCTT GCCGGCAGGA
ACAGTCATTA CATCAGGTGC AAATACCAGA ACAATCACGG TAACAGCAGG GGCAACGTCA
GGAAATATTT CTGTTAGACC AACAAATACG ACCTGTGCAG GAACAACCGC TTCGCTTGCT
GTTACGGCTG GTGTACCAAC AGGCACAGCA GCTATCAGCG GCGCGGCAAC AGCGTGCCAG
AGCACAGGTG GTTTTGTATA TGCTGTTTCA GGTGTTAATG CAGCAACAAC GTATAATTGG
TCTGTACCGC CGGGAGCGAG TATTACAAGC GGTGCAGGTA CAAATACCAT AACGGTTACA
ATGGGGACAA CGGCAGGTGC GATAAGCGTT ACTCCTGCAA ATATCTGCGG CAATGCTACA
GGTGTAACGG TTGCTACAAA AGCTGTAGCG CTTTCCGTTC AGCCGGCTGC AGCAATTGCA
TATCCGTATA CAACGTATTG TAAAAATACA ACTACTCAGG CTCCGCTAAT CACGGGAACC
ACCGGCGGTA CATTTTCTTC CTCGCCAACA GGTTTATCTA TGAACAGCTT AACAGGAATC
ATTACAGGGA GCTCAAGTAC AGCAAGAGCG TATACGATAA CCTATACTGC CCCGGCTGCT
ACAGGATGCA GCAATGCTAC AGCAACACAA TCCATTACCA TTGTAAGCAC AAATATGACA
CCTGTAACGT CTGCTATTAC AGGTTCCGGT TCTTCTTGTC AAAATGGTAC AGGCACTTAT
TCAATCACGA ATACTGTTAC GTCATATGAC TGGAAACTTC CATCCGGTTC AACAATCAGC
AGCGGATCTT CAACACAATC AATAGGTGTG CTGTTTGGTA CCGCATCCGG TGTTATTTCT
GTTACACCGC TTACTACTTG CGCCGGTAAT ACAGCAACAG TAACTGTTAC CGTGTCTCCA
TGCGCAAAAA CCTGGAACGG TTCTGCAGGG TCTGATTGGA GTACTGCTGC TAACTGGTCG
CCGTCTATTG TTCCTGCCGC TACAGAAGAT GTTACTATTG CTAATGTTGC GTCAAAGCCT
GTTGTTAGTG CGGGAGCAAC AGGCAATACA AAAAATCTTA CCATTAATTC CGGAGCAGGC
CTTACCATCA GTTCTGCCGG TACAGTAAAT GTAACCGGCA ATGTTGTGAA CAACGGTACG
TTTACAGCCT CTTCAGGTTC TACACTTGGT TTTACAGGTA CTACAGCACA AACAATTACA
GGTGTGCCTT CCATTTATAA TTTAAATATT AATAACGCTG CTGGTGTATC CGTACTTTCA
CCACTTGCAG CGAACGGTAC AATCTCCTTG CTAAACGGTG CCCTAACAAC AAATTCCAAT
CTTACCCTGG AGTTCGATAA TGGAGGGAAT GTTGGATATG CTGCATCAGA CGCAGGAAGT
ATTTCCGGAA ATGTTGCCGG CAGAAGAAAT GCATTGATCC GTACGCATTA TGTAGCCGCC
CCTTTTAACG GAGTAAGTTC AGCACAGGTA GGCGCAACCA CGCCGTTATT CTACAACGGT
AACTGGAAAA TGTATGTTAA ATCATTTGAT AACCAGGGTT GGAATGCGAT AACAGATGCC
ACAATGGCAA TGCCATTAGG TACCGGATAT TCGGTAGCGC TTCCTTCTCT TTCTGTTTTG
CTGTTTTCAG GAACGTATAA CCACAACTTT CAACTTACCG GTACATCGTA TTCAAACACC
GTAGCAGGAA AATATATGTT AGTTGGAAAC CCATATCCAT CAACATTAGA TTGGAGCAGC
ACAAGCGGAT GGACAAAAAC AAATATTGCA GATGCCATTT ATCTATGGAG TGCTTCTACA
AATCAGATCT CAAGCTGGGT AGGGGGAGTT ACTTCAGGAC CTAATGCTTC AAAATATATT
CCGGCAATGC AGGCATTTAT GGTAACAACT ACAGGTTCCG GCGGAATGGC TAGTTTAGGC
ATTAATAATA ATGCCCGTGT GAGTAACCAG AATGTGGCAT ATGCGCGGGA AGGTGCCGAT
GAAACAGTCC GGATTAAAAT TCAGACAGAA AACAGTGATT TGTGGGATGA TGCCGTAATT
CGTTTTAATG AAATGGCAAC AAACGATTTC GACCCTGATT TCGATGCCTA TAAAATTATT
AATTATGGAA TTGCGCCTTC TATTTATACA ACCCTTGGCT CAACCCTCTA CTCCATCAAT
TCTGTAGCGG ATCCGCTTGC GTTGTCCAGT ATTCCTGTGT CTGTAAAATT ACCTTCCGAT
GGTAATTATA TATTAAGTGT AGTAAAAAGC GATCCGGCAA TTGATTACGT GCTGATCGAT
AAAAAATTTG GAATAGAAAA CCTGATTTCA GGACCCGGCT ATACATTTGT TGGTCTGGCT
TCGGATAATA CCGATCGTTT TGAACTTCAG TTACGAACAG CAGTTACTAC AGGTATTTAC
CAGACTCAGG CACACAGCGG TTTGAAAATT AATGCTGCAC CGAAAGGTTT TGTTATTCAG
ACAGACATGT ATGCTGCGAA TGACGCACGT ATAGAAATTT TGGATATGAC TGGAAAAATA
ATTCAGGTAA TGGCGCAAAA TAATTTAAAC AGTGGTACTA CGTTTGTTCC GCTGGATCTG
GCAGATGGGG CCTACCTTAT TAAAGTGTCT GTGGCAGAGG AAGAATTTTC AGGAATGATT
TCACTGATCA GGTAA
|
|---|
| Protein sequence | MEKFLRIKIE NENLIADHTF DKVKKRKQEY FNLTFCTGKI KAVALSMLFF LLLSYSGHAA
VKTSAAAGNW NVAANWTSSG VPGSTDQVTV NNIMTLNADL TINSGGIYTF NSNSTGTMVL
KMGDHLLTGG GDLNINAPAV VTMGSGDLYF GTIHVYAGAT LNITGNLDIT ASNIIVDEGG
ILNVGGNFLN TNSSVVVNGI IAIGGKYVSN ATALASATVT GTGSITSNGV MTNSTFLGSS
TIFGSSGDCN AGPCNGGCIA GMTALPVTGP GMICSGTSNL VYTTNPVSGA SSYVWTLPAG
TVITSGANTR TITVTAGATS GNISVRPTNT TCAGTTASLA VTAGVPTGTA AISGAATACQ
STGGFVYAVS GVNAATTYNW SVPPGASITS GAGTNTITVT MGTTAGAISV TPANICGNAT
GVTVATKAVA LSVQPAAAIA YPYTTYCKNT TTQAPLITGT TGGTFSSSPT GLSMNSLTGI
ITGSSSTARA YTITYTAPAA TGCSNATATQ SITIVSTNMT PVTSAITGSG SSCQNGTGTY
SITNTVTSYD WKLPSGSTIS SGSSTQSIGV LFGTASGVIS VTPLTTCAGN TATVTVTVSP
CAKTWNGSAG SDWSTAANWS PSIVPAATED VTIANVASKP VVSAGATGNT KNLTINSGAG
LTISSAGTVN VTGNVVNNGT FTASSGSTLG FTGTTAQTIT GVPSIYNLNI NNAAGVSVLS
PLAANGTISL LNGALTTNSN LTLEFDNGGN VGYAASDAGS ISGNVAGRRN ALIRTHYVAA
PFNGVSSAQV GATTPLFYNG NWKMYVKSFD NQGWNAITDA TMAMPLGTGY SVALPSLSVL
LFSGTYNHNF QLTGTSYSNT VAGKYMLVGN PYPSTLDWSS TSGWTKTNIA DAIYLWSAST
NQISSWVGGV TSGPNASKYI PAMQAFMVTT TGSGGMASLG INNNARVSNQ NVAYAREGAD
ETVRIKIQTE NSDLWDDAVI RFNEMATNDF DPDFDAYKII NYGIAPSIYT TLGSTLYSIN
SVADPLALSS IPVSVKLPSD GNYILSVVKS DPAIDYVLID KKFGIENLIS GPGYTFVGLA
SDNTDRFELQ LRTAVTTGIY QTQAHSGLKI NAAPKGFVIQ TDMYAANDAR IEILDMTGKI
IQVMAQNNLN SGTTFVPLDL ADGAYLIKVS VAEEEFSGMI SLIR
|
|---|
| |