Gene CHU_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0833 
SymbolgalE 
ID4185738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp939655 
End bp940614 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content42% 
IMG OID638070838 
ProductUDP-galactose-4-epimerase 
Protein accessionYP_677459 
Protein GI110637252 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.030089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA TATTGATTAC AGGCGGAGCA GGGTTTATCG GTTCAAACCT GACAGAAGCG 
TTATTGAACA GAAGTGATGT TGAGCTGGTG CGTGTACTGG ATAATTTTTC AACAGGATAC
CAGCACAACA TACATGAATT TTTGACCCAC CCCAAATATG AATTTGTTGA GGGCGATATC
CGTAACTATG AAGATGTAGT TAAAGCAGTA GAGGGAATCG AAGTGATCAG CCATCAGGCT
GCACTTGGTT CTGTACCGCG TTCGCTAAAA GATCCTATGA CCAGTAATAA TGCAAACGTG
CTGGGTTCCA TGAATGTTTT TCATGCTGCA AAAGAATCAG GTGCAGACCG TGTCGTGTAC
GCATCTTCCT CTTCGGTTTA TGGAGATGAT CCGGGTTCAC CTAAGGAAGA AGACCGTTTG
GGTAATGTGT TGTCTCCGTA CGCTGCAAGT AAGCGCAGTA TTGAACTGTA TGCAAAGGCG
TTCAGCAACG TCTATCCATT TCGTTTTATT GCTATGCGTT ACTTCAATGT GTTTGGTCCC
AGGCAAAATG CGCAGGGAGC ATATGCTGCC GTAATACCTC AATTCATAAC TGCATTATTA
AATGGGCAGC AGGCTACAAT CTTCGGAGAT GGCTCCCAGA CACGCGATTT TACCTTTATT
GATAATGTAT TACAAATGAA TATAAAAGCA CTGTCTACAG ATAATGCAGA TGCGTTTAAC
AGATATTATA ATGTAGCCTG CGGCTCAACA ACTTCCTTGA ACCGTGTATA TGCTATACTT
GCAGGCTGTG CCGGCTCAGA CATTAAGCCC CATTATACGG ATCCAAGACA AGGAGATATA
AAAGACAGTC TGGCCAATAT CAGTTTAGCG CAAAAGCACA TTGGATATAA ACCCGAAATA
CAGATTGAAG AAGGATTAAT TAAAACCTTC GACTGGTTTA AAAAGAATCA AGGTGAATAA
 
Protein sequence
MKRILITGGA GFIGSNLTEA LLNRSDVELV RVLDNFSTGY QHNIHEFLTH PKYEFVEGDI 
RNYEDVVKAV EGIEVISHQA ALGSVPRSLK DPMTSNNANV LGSMNVFHAA KESGADRVVY
ASSSSVYGDD PGSPKEEDRL GNVLSPYAAS KRSIELYAKA FSNVYPFRFI AMRYFNVFGP
RQNAQGAYAA VIPQFITALL NGQQATIFGD GSQTRDFTFI DNVLQMNIKA LSTDNADAFN
RYYNVACGST TSLNRVYAIL AGCAGSDIKP HYTDPRQGDI KDSLANISLA QKHIGYKPEI
QIEEGLIKTF DWFKKNQGE