Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0833 |
Symbol | galE |
ID | 4185738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 939655 |
End bp | 940614 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638070838 |
Product | UDP-galactose-4-epimerase |
Protein accession | YP_677459 |
Protein GI | 110637252 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.030089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA TATTGATTAC AGGCGGAGCA GGGTTTATCG GTTCAAACCT GACAGAAGCG TTATTGAACA GAAGTGATGT TGAGCTGGTG CGTGTACTGG ATAATTTTTC AACAGGATAC CAGCACAACA TACATGAATT TTTGACCCAC CCCAAATATG AATTTGTTGA GGGCGATATC CGTAACTATG AAGATGTAGT TAAAGCAGTA GAGGGAATCG AAGTGATCAG CCATCAGGCT GCACTTGGTT CTGTACCGCG TTCGCTAAAA GATCCTATGA CCAGTAATAA TGCAAACGTG CTGGGTTCCA TGAATGTTTT TCATGCTGCA AAAGAATCAG GTGCAGACCG TGTCGTGTAC GCATCTTCCT CTTCGGTTTA TGGAGATGAT CCGGGTTCAC CTAAGGAAGA AGACCGTTTG GGTAATGTGT TGTCTCCGTA CGCTGCAAGT AAGCGCAGTA TTGAACTGTA TGCAAAGGCG TTCAGCAACG TCTATCCATT TCGTTTTATT GCTATGCGTT ACTTCAATGT GTTTGGTCCC AGGCAAAATG CGCAGGGAGC ATATGCTGCC GTAATACCTC AATTCATAAC TGCATTATTA AATGGGCAGC AGGCTACAAT CTTCGGAGAT GGCTCCCAGA CACGCGATTT TACCTTTATT GATAATGTAT TACAAATGAA TATAAAAGCA CTGTCTACAG ATAATGCAGA TGCGTTTAAC AGATATTATA ATGTAGCCTG CGGCTCAACA ACTTCCTTGA ACCGTGTATA TGCTATACTT GCAGGCTGTG CCGGCTCAGA CATTAAGCCC CATTATACGG ATCCAAGACA AGGAGATATA AAAGACAGTC TGGCCAATAT CAGTTTAGCG CAAAAGCACA TTGGATATAA ACCCGAAATA CAGATTGAAG AAGGATTAAT TAAAACCTTC GACTGGTTTA AAAAGAATCA AGGTGAATAA
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Protein sequence | MKRILITGGA GFIGSNLTEA LLNRSDVELV RVLDNFSTGY QHNIHEFLTH PKYEFVEGDI RNYEDVVKAV EGIEVISHQA ALGSVPRSLK DPMTSNNANV LGSMNVFHAA KESGADRVVY ASSSSVYGDD PGSPKEEDRL GNVLSPYAAS KRSIELYAKA FSNVYPFRFI AMRYFNVFGP RQNAQGAYAA VIPQFITALL NGQQATIFGD GSQTRDFTFI DNVLQMNIKA LSTDNADAFN RYYNVACGST TSLNRVYAIL AGCAGSDIKP HYTDPRQGDI KDSLANISLA QKHIGYKPEI QIEEGLIKTF DWFKKNQGE
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