| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0826 |
|---|
| Symbol | |
|---|
| ID | 4185966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 929844 |
|---|
| End bp | 930812 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638070831 |
|---|
| Product | permease |
|---|
| Protein accession | YP_677452 |
|---|
| Protein GI | 110637245 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1284] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.668966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATAAAC TACTTTCAAG AATCATTGAA ACGTCTGTAA TAAACAGAAG GCGTGAATCA
AAAGAACAGT ATTCTTCTTT TGAAAAGGCT AAAGAGTTTC GTCTTCTTAA AATAGATCTT
GGCAGAGTGG TTAAAGATAT TATACTTATT TCATTAGGTA TTATGTCTGC GGCCATCGGG
TTGAAAAGTT TTCTTCTTCC AGCTAAATTT ATAGATGGAG GTGCAACCGG TATTGCACTG
TTATTATCCG AACTTACAAA GATAGAACTG GCAAGCCTGC TGATTCTGGT AAACATTCCA
TTTGTTGTTT TAGGGTATCA TGTGATCAGC AAAAAATTTG CAATTAAAAC CGGCATTGCC
ATTGCTGTGC TGGCCATTGT TACGCATTTA TTTTCTTTCC CTGAGATTAC GCACGACAAA
TTACTGGTAA GTATTTTTGG TGGCTTTTTC TTAGGTGCCG GTATCGGTTT CTCTGTACGC
GGAGGTGCTG TTATTGATGG AACAGAAGTA CTGGCAATTT ATGTAAGCCG CAAATTTGGC
GTTACCATGG GCGATGTAAT CATTGGTTTT AATGTATTGA TTTTTTCAGT AGCAGCGTAT
ACACTTACCA TTGAAACAGC TTTATATTCT ATGATCACGT ATTTAGCAGC GTCCAAAACC
ATTGACTTTG TTGTTGAAGG TATTGATGAA TACATTGGCA TTACGGTTAT TTCATCGCAC
AGCGAAGAAA TACGGGAAAT GATTACAACA AACATGCACA AAGGTGTTAC GGTATACAAG
GGCAAACGCG GATTTGGAAA ACATGGCCAT GTAGATGATC TGGATATTAT TTATACCATC
ATAACCCGTT TGGAGATAAG TAAAATAAAT ACCGAAATTG AAAAAATTGA TCCGAATGCA
TTTGTTGTCA TGACAAGTGT AAAAGATACC CGCGGCGGCA TGGTTAAGAA AAGACGCCTG
AAACATTAA
|
|---|
| Protein sequence | MNKLLSRIIE TSVINRRRES KEQYSSFEKA KEFRLLKIDL GRVVKDIILI SLGIMSAAIG
LKSFLLPAKF IDGGATGIAL LLSELTKIEL ASLLILVNIP FVVLGYHVIS KKFAIKTGIA
IAVLAIVTHL FSFPEITHDK LLVSIFGGFF LGAGIGFSVR GGAVIDGTEV LAIYVSRKFG
VTMGDVIIGF NVLIFSVAAY TLTIETALYS MITYLAASKT IDFVVEGIDE YIGITVISSH
SEEIREMITT NMHKGVTVYK GKRGFGKHGH VDDLDIIYTI ITRLEISKIN TEIEKIDPNA
FVVMTSVKDT RGGMVKKRRL KH
|
|---|
| |