| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0824 |
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| Symbol | |
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| ID | 4185964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 928195 |
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| End bp | 928773 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638070829 |
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| Product | RNA polymerase specialized sigma subunit |
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| Protein accession | YP_677450 |
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| Protein GI | 110637243 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGAAA AGGAAAAAGT CATCATTGAA AGTATCCGCA GCGGTGCAAA TAATATTGCA
TTAGAGTATC TCTATGACAT CAGTTTGAAG AAAGTAAGAC AGTACATTCT TAAAAACAAT
GGCAGCAAGG ATGACGCAAA CGATATTTTC CAGGACGCGG TAATTGTTTT ATTCAATCAG
ATCCGGTTAA ATAAATTCAA TGAAGCCTAT TCCATCGATG CCTTTATATA CTCCGTAGCG
CGGAATTTGT GGATCGATAA AGTCCGCCGG GATAAAAAAT TTACCAAATA CGATTCGCCG
GATGATTACG CTGTTATTGC TTCAGACACC AATCACCTGG ATGCATTGAT ACAAAAAGAG
AAAAGCGCTG CAATGAAAAC GGTATTCAAT TTATTGGATG AAAAATGCCG GAATATATTA
ACTTACGTGA TCTACGAAAA GCGTTCGATG AAGGAAATCA AAGAGTTAAT GGGTTACAGC
AGCGAAGATG TTGCAAAGAC GAATCATTAC AGATGCAAAC AATATTTAAC CAAACTGGTG
AAAAGCAATC CTTCATTAGT TGATTTATTA CGAAATTGA
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| Protein sequence | MSEKEKVIIE SIRSGANNIA LEYLYDISLK KVRQYILKNN GSKDDANDIF QDAVIVLFNQ
IRLNKFNEAY SIDAFIYSVA RNLWIDKVRR DKKFTKYDSP DDYAVIASDT NHLDALIQKE
KSAAMKTVFN LLDEKCRNIL TYVIYEKRSM KEIKELMGYS SEDVAKTNHY RCKQYLTKLV
KSNPSLVDLL RN
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