Gene CHU_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0802 
Symbol 
ID4183976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp904891 
End bp906180 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content42% 
IMG OID638070808 
Producta-glycosyltransferase 
Protein accessionYP_677429 
Protein GI110637222 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0022358 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAAAA CAAAGGTTTT GATGTTGGGT TGGGAGTTTC CGCCAATTAT TAATGGTGGA 
TTGGGGGTAG CCTGCCTTGG TTTAAGTAAA GCCCTGTCCA AACAAGTAGA CCTTACCTTA
ATTCTACCAA AAAGTGACCC TTCTGTCCTG CTGAACCAGG TGGATATTAT TGGATTAAAT
CAACAGGAAC GCATCCGGAT CCGCGAGGAT TTTCAAACCG ATTTTTATGC AGAACTGGAA
AATGTATACA CGCTTCCGTC AACTATCTTA CCCTATCAGA CAGTTGCAGA ACCTGAAATA
ACAACTAAAA AAGTACAGAA GGTTAAAAAA CAGAAAGTTT CCCGATCTGA ATTTTATAAA
CCCTTTCAGA TCGAAAATCT GTATGGCAGT GATACCATTC AAAAAGTAAT TGAATATGCT
ACCGTCAGTG CAGACATGTG TATGGAATGG GATTTTGATG TGATCCATTG CCACGACTGG
ATGACGATGC TTGCCGGCGT TGAAATTAAA CAACGTACAG GCAAACCGCT GGTACTGCAC
ATACACTCGC TTGAATACGA CAGAAATCCC GGAACGGGAA ACAACTGGGT ATACCAGGTA
GAAAAACATG CGATGGAAAT GGCCGACGCT ATTCTTCCGG TAAGCGATTA TACCGGAACG
ATTGCGGTTA AAGAATACGG CATTAATCCA CGTAAAATAC ATTCGGTACA TAACGGCGTT
GAAAAAATAA CGCCATTCAA AATAGAAAAA CCGTTCCCTG AAAAAATCGT TTTATTTATT
GGCCGCGTTA CGCACCAGAA AGGCCCGGAA TATTTTATTG AAGTTGCGTC CAAAGTATTA
AAGGAATACC CGTTGGCGCG CTTTGTTGTT GCGGGCACAG GCGATAAGCT AAAGGAATTG
ATTGAAACCG GTGCGCATAA ACAGTTAGGC TTAAATGTTC ACTTCACCGG TTTTTTAAGT
AAAGAAAAAA TTCACGATCT GCTTGCCATG GCAGATGTCT ATTGTATGCC TTCAGTATCT
GAACCGTTTG GTTTATCGGC ACTGGAAGCC GCACAGTTTG GCGTACCGTG TATTGTATCC
AAACAATCCG GTGTTTCAGA AGTGTTGATC GGCGCGCTTA AAGTAGATTT CTGGGACGTA
GATAAAATGG CGCATTACAT TCTGATGCTC TTAAACGATC CGTCCTTTGC AAAAACGATT
TCAACAAACG CTCATTTCGA TTTAGAATAT TGCACCTGGG AAAATGCAGC CCTTGAAATA
AAAGACATCT ACAACGAACT CTTAGCTTAA
 
Protein sequence
MKKTKVLMLG WEFPPIINGG LGVACLGLSK ALSKQVDLTL ILPKSDPSVL LNQVDIIGLN 
QQERIRIRED FQTDFYAELE NVYTLPSTIL PYQTVAEPEI TTKKVQKVKK QKVSRSEFYK
PFQIENLYGS DTIQKVIEYA TVSADMCMEW DFDVIHCHDW MTMLAGVEIK QRTGKPLVLH
IHSLEYDRNP GTGNNWVYQV EKHAMEMADA ILPVSDYTGT IAVKEYGINP RKIHSVHNGV
EKITPFKIEK PFPEKIVLFI GRVTHQKGPE YFIEVASKVL KEYPLARFVV AGTGDKLKEL
IETGAHKQLG LNVHFTGFLS KEKIHDLLAM ADVYCMPSVS EPFGLSALEA AQFGVPCIVS
KQSGVSEVLI GALKVDFWDV DKMAHYILML LNDPSFAKTI STNAHFDLEY CTWENAALEI
KDIYNELLA