Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0785 |
Symbol | yajF |
ID | 4184155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 887779 |
End bp | 888654 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638070791 |
Product | N-acetylglucosamine kinase |
Protein accession | YP_677412 |
Protein GI | 110637205 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.82704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0143215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAAAA TTGGTATTGA CTTAGGTGGA ACAAAAATAG AAACGGTTAT TCTGAATCCG GAAGGTGCTG AGATCTATCG AAACAGAGTG CTGACCCTTC AGGAGCGTGG ATATGCTGCC ATTGTCAATA CAGTTGCTGA AGCATATTCG AATGCATTAA CGGTAATCAA TAATAAAGCA CATACCTTTG GTATCGGTAC ACCGGGCTCG GTCTCCTCTA AAACGGGATT GATGAAAAAT TCAAATACCG TATGTTTAAA TGGAAAACCG TTGCAGAAAG ATTTGCAGAA GCTGATCAAC AGACCGGTTT CGATTGAAAA CGATGCGAAT TGTTTTGCCA TGGCAGAAGC CAGGATTGGC GCGGGAAAAG GACATGCAGT TGTGTTTGGT GTAATTATGG GAACGGGTTG CGGCGGCGGA ATTGTTATTC AGAACAATGT GCTCAATGGC CTGCAGTCGC TGGGCGGCGA ATGGGGGCAT ATGACGGTCG ACCCCAATGG CCCGCTGTGT TATTGCGGTA AAAAAGGATG TGTGGAAACG TATATTTCCG GCTCCGGTAT TTCAAACCAG TATTTTGAAT TAACAGGCAA ACGCTTGCCT GCCATACATA TTTTAGAATC AGAACAAAAA GAAGCGGTTG AAGTAAAGGA ATCTTTTCTG GATCAGTTTG GGCGTGCGCT TTCAAACGTA ATTTCAATTA TTGATCCGGA TATGATTGTG TTGGGCGGAG GGTTATCGAA CTATTTACCG CTCTATTCAG AAGGTATTGA AAGAGTTAAA AAGTATATTT TTAGTGATGA TTTAATAACA CCTATTGTAA AAAACAAAAC AGGAGATAGT GCCGGTGTAT TAGGTGCTGC CTGGATCGGC CGTTAA
|
Protein sequence | MFKIGIDLGG TKIETVILNP EGAEIYRNRV LTLQERGYAA IVNTVAEAYS NALTVINNKA HTFGIGTPGS VSSKTGLMKN SNTVCLNGKP LQKDLQKLIN RPVSIENDAN CFAMAEARIG AGKGHAVVFG VIMGTGCGGG IVIQNNVLNG LQSLGGEWGH MTVDPNGPLC YCGKKGCVET YISGSGISNQ YFELTGKRLP AIHILESEQK EAVEVKESFL DQFGRALSNV ISIIDPDMIV LGGGLSNYLP LYSEGIERVK KYIFSDDLIT PIVKNKTGDS AGVLGAAWIG R
|
| |