| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0782 |
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| Symbol | |
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| ID | 4184152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 883369 |
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| End bp | 884976 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638070788 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_677409 |
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| Protein GI | 110637202 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.200041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG TAATCATACA TATTGTATTT TTTCTGACTT CCATAACAGG ATATGGGCAG
CAGACAGTAT CAATACCGGA TGCTGCTTTT TTAGCATTTT TAAAAAACAA TTTTCCACAA
ACCATAAATA CATCAGACCA GCTTGTGACC AGCATTGCAG CGCAGGTTAC AGGAAATATT
TCCTGCGGCA ATTCAGGCAT CACAAATCTG GAGGGAATTC AATATTTTTC TAAAGTTACC
AAGATCAGTG CCATTAATAA TAACATTGTT TCTATTCCGT CCTTATTGCC CATGACGAAT
CTTGAGACGG TGCATATTTA CAATAATAAA TTAGCTACAA TGCCCGATTT TGCAGGCATG
CAGAAATTAA AAACGGTATT GCTGTATGAA AATGAATTAA CACAAATGCC CTTGTTTGGC
AATAATCCCA TCATTGAAGA AATCATTATT TCAAAAAATA AATTAACCAG TCTGTCGCCC
TTGTCTGTTG TGCCTTCGCT GTTAAAATTA GATGTTGGTG AAAACGCATT GACGCAACTT
CCGGATCTTT CCCTCAATGT AAATCTAGAA GAGTTAATCT GCTGGTCCAA TAAACTTACC
GCACTGCCAT CCTTAAAAAA TCTGACAAAA CTGAAGCGGT TAAATGCCGG TACAAATAAA
TTAACCCAGA CACCTGATTT GTCGGCCAAT ACAGCTCTTA CAATCGTTGC CCTGGATAAT
AATTTCCTGA AGGATATACC AAATATTCTG GACTATAACT TAACAACCGT GAAGTTATAC
AATAACTATT TTACGTTTGA AGATTTGTAT CCGTACACAA CACGGGCGAA TTTTTCAACT
GCGTTTGATT GCACACCGAT GCTGCGGATA CCCATTGCAG ATACAATTGA TGCATATTAT
AGTCAGTCAG TAGATATTCA TACAAACATT GATAAAACGT TAAGTAATGT AACGTATGAA
TGGTTTGAAG GCAGTGCCTC TGTGGCAGTA GGTGATGCCG CGGTTATAAC TTCCGCAAAC
GGAACGGGCG TATCCAAACG TTACCTGTAT GCTAAAATTA AACACCCATC CATTCCGAAT
CTCACATTAA CAACGGATTC AATCCTGGTT CGCTTTAATC CGTGTCCGGT GTCAGCAGAC
ATCACATACA CTGCTTCTAA AAAAGACTGC GGCAATGCAG GAGCTGTGAA CATAGACGTA
CACGGGTATG TTCCGCCAGA AACAACCTAT ATCTTAACAA GCACATCATT TGGCTCCAAC
GAATATTATC AGTCGGGCAA TATTACTGGC CTGGTTGATA CTGCCTATCA ATTACAGATT
GAATTTATAC CAGGCTGTGT GGTAGATTAC CTGCCATTGA TTGAGATGCC TTATGTAGAT
TGTAAAGAAG TGTTCATGAC CCCGAATGGA GATGGCGACA TGGATACCTA TTTTATTCCC
GGTTCAGGCA ATGCCATTAT TTATGATAAG AACGGGAGGG AAGTAAAAAA AGTAAAATTA
CCCTACGAAT GGAATGGCTA TGGCCCGAAT GGACTGGTAC AGGCAGGGTA TTACATCATT
GTGGTAAATG GCGGCAAAGA CCGGATCTAC ATCAGTGTAC TGTATTGA
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| Protein sequence | MKKVIIHIVF FLTSITGYGQ QTVSIPDAAF LAFLKNNFPQ TINTSDQLVT SIAAQVTGNI
SCGNSGITNL EGIQYFSKVT KISAINNNIV SIPSLLPMTN LETVHIYNNK LATMPDFAGM
QKLKTVLLYE NELTQMPLFG NNPIIEEIII SKNKLTSLSP LSVVPSLLKL DVGENALTQL
PDLSLNVNLE ELICWSNKLT ALPSLKNLTK LKRLNAGTNK LTQTPDLSAN TALTIVALDN
NFLKDIPNIL DYNLTTVKLY NNYFTFEDLY PYTTRANFST AFDCTPMLRI PIADTIDAYY
SQSVDIHTNI DKTLSNVTYE WFEGSASVAV GDAAVITSAN GTGVSKRYLY AKIKHPSIPN
LTLTTDSILV RFNPCPVSAD ITYTASKKDC GNAGAVNIDV HGYVPPETTY ILTSTSFGSN
EYYQSGNITG LVDTAYQLQI EFIPGCVVDY LPLIEMPYVD CKEVFMTPNG DGDMDTYFIP
GSGNAIIYDK NGREVKKVKL PYEWNGYGPN GLVQAGYYII VVNGGKDRIY ISVLY
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