| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0774 |
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| Symbol | hemE |
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| ID | 4184144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 874985 |
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| End bp | 876019 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638070780 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_677401 |
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| Protein GI | 110637194 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.352991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATACC AAAATGATTT AATATTAAGA GCTGCCCGCG GAGAAGCTGT TGAACGTACT
CCCGTTTGGC TGATGCGCCA GGCAGGAAGA ATACTTCCGG AATACCGTGC CGTTCGTGAA
AAATTAAGCG GATTTATTGA ATTATGCACC ACACCTGCCT TAGCGGCGGA GGTTACTATT
CAGCCCGTGG ACATATTAGG CGTAGACGCC GCCATTATCT TCTCTGATAT TCTTGTCATT
CCCGAAGCAA TGGGTTTACC TTATGAAATG CAGGAAAGCA AAGGACCGTT TTTCCCAAAG
GTAATTACTT CGGCTGCTGA TATTGATGCC TTGCTGGCAA CAGATGCAGC CGATCATTTA
ACGTATGTCT ATGATGCGAT TGAGCTTGCT GTAAAAGAAT TGAACGGACG TGTGCCGTTA
ATTGGTTTTG CCGGAGCTCC GTTTACCATT CTTGCGTACA TGATCGAAGG GCAGGGTTCT
AAGACATTCT CTAAGGCCCG CCGTTTCTTA TATACAGAAC CTGTGCTTGC ACACCGCTTA
TTAGAAAAAA TTACACTGGC TACAATTGCG TATTTAAAAC GTCAAGTTCA GGCTGGAGCT
GCCATGTATC AGATCTTTGA TTCCTGGGCA GGCGTTTTAC CTCCGGATCA ATACCGCGAA
TTCTCTTTGC GCTACATCAA ACAGATATGT GAAGCTGTAC CTCAGGTGCC CCGAACAGTA
TTTTCGAAAG GTGCTTTTTT TGTGCGTGAA GATTTCAACA ACTTCCCCTG CGAAACGGTT
GGCCTGGACT GGAATATGGA TATTGGGGAA TCAAAAAAAA TTATTGGTCC GCATAAAACA
TTACAAGGCA ATATGGATCC TTGTGCATTG TATTTATCCG AAGAACAGAT CCGTGTGAAG
GCAAAAGAAA TGCTGGATGC ATTTGGCACG CAAAGCCACA TTGCAAACCT GGGTCATGGC
TTGTATCCGG ACACAGATAA AACAAAAGTG AAATGTTTTG TGGATGCCGT AAAGGAATTC
GGTGTTAAAA AATAA
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| Protein sequence | MQYQNDLILR AARGEAVERT PVWLMRQAGR ILPEYRAVRE KLSGFIELCT TPALAAEVTI
QPVDILGVDA AIIFSDILVI PEAMGLPYEM QESKGPFFPK VITSAADIDA LLATDAADHL
TYVYDAIELA VKELNGRVPL IGFAGAPFTI LAYMIEGQGS KTFSKARRFL YTEPVLAHRL
LEKITLATIA YLKRQVQAGA AMYQIFDSWA GVLPPDQYRE FSLRYIKQIC EAVPQVPRTV
FSKGAFFVRE DFNNFPCETV GLDWNMDIGE SKKIIGPHKT LQGNMDPCAL YLSEEQIRVK
AKEMLDAFGT QSHIANLGHG LYPDTDKTKV KCFVDAVKEF GVKK
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