Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0773 |
Symbol | fucP |
ID | 4184143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 873232 |
End bp | 874689 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070779 |
Product | fucose permease |
Protein accession | YP_677400 |
Protein GI | 110637193 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.380581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCAA TTGGAGCTCC AGTAGAAAAT AGAACATCCA CTAATCACGA CAATAAAAAT TACACTTTTC CATTAATTGT AATTACCACA TTATTTTTTA TGTGGGGCTT TATTACCTGC TTAAATGATA TTCTGATTCC AAAATTCAAA GGGCATTTTG ATTTACTGGG ATGGCAGGCT ATGCTGGTGC AGTCAGCATT TTTCAGTGCA TTCTTTCTTG TTTCATTATT ATATTTCATC GTATCTGCAT TAGGCTTTGA TCTTATTTCA AAAATAGGTT ACAAAAATGC AATCATTGTT GGTTTGGGTG TTTCAGGCAT TGGCTGTTTA TTATTTATTC CTGCTGCTGA CAACGAAAGT TTTAATTCAT TCCTTGGAGC GTTATTTGTA TTGGCTTCGG GTATTACAAT TCTTCAAATG GGCGCTAACC CATACGTGGC GCTACTTGGC GCACCTCAGG GTAGTTCTGC CCGGTTAAAT ATGACCCAGG CTTTTAACTC TCTTGGTACA ACTGTCGCTC CGGTTATCGG CGGCATGCTG ATCTTCAAAG CAAGTTCTTC AGCGGTTGAA AAATCACTGG AGTCTGTAAA GCATCCATAC ATTGGTTTAG CAGTAGCCTT ATTTGTATTA GCAGCAATCA TTGCTGTAGT ACCGCTTCCT AAATTATCCG GTAATGACGG CGAGGCGGAG CAAAAAGGAA TTGGTGCGTA CAAGTATTTA CATTTATTAT TAGGTGTTGG CTGTATCTTC TTTTATGTAG GCGGCGAAGT ATCTATCGGT TCAGCAATCA TCAATTACCT TGAACTTGAA AAAATTGCTG GCTTAACTCC TGAAAAAGCA GATAAATATT TATCGTTCTA TTGGGGAGGT GCCATGATCG GCCGTTTCTT CGGTGCAATT TTCTTAAATG AAACAACAGA CATTAAAAAA CACGGTGTAA TGCTTGCCGG TATTATGTTG CTTTCTTATA TCCTTGGAAC ATTCTTAATG AACAAAGATA TTTTATTGCA TGGTGAAAAT ATGCCGATGG ATTTTACGAC CCCCATTTAC TTCACAGGTA TTACGCTCTT AAATTTAGCA GCTTTCTATT ATGGTAAAAA TAAACCAGGC TTTACATTAG GTTTGTTTGC TGGTATTGTT TGTTTCTTAC TTGCTGTTAC CATGTTTGCA AGCGGATCTA TTGCTATGTG GGCGGTGTTA TCAATCGGCT TGTTCAACTC TATTATGTTC CCTACCATCT TTACATTAGC GATTAAAGAT CTTGGTGTAG ATACCGGCCA GGGAGCTTCT TTGTTGGTAA TGGCTATTGT AGGCGGTGCT ATTATTCCTC CGCTTCAGGG TTTACTTTAT GGCGAGGCTA ACAGCGGTTT ACAGACGTCA TTCATTGTTC CGTTGATTTG TTATGTATAC ATCATGTATT ATGGTTTTGT AGGGTCAAAA CCTAAGAGAT TAAGCTAA
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Protein sequence | MAAIGAPVEN RTSTNHDNKN YTFPLIVITT LFFMWGFITC LNDILIPKFK GHFDLLGWQA MLVQSAFFSA FFLVSLLYFI VSALGFDLIS KIGYKNAIIV GLGVSGIGCL LFIPAADNES FNSFLGALFV LASGITILQM GANPYVALLG APQGSSARLN MTQAFNSLGT TVAPVIGGML IFKASSSAVE KSLESVKHPY IGLAVALFVL AAIIAVVPLP KLSGNDGEAE QKGIGAYKYL HLLLGVGCIF FYVGGEVSIG SAIINYLELE KIAGLTPEKA DKYLSFYWGG AMIGRFFGAI FLNETTDIKK HGVMLAGIML LSYILGTFLM NKDILLHGEN MPMDFTTPIY FTGITLLNLA AFYYGKNKPG FTLGLFAGIV CFLLAVTMFA SGSIAMWAVL SIGLFNSIMF PTIFTLAIKD LGVDTGQGAS LLVMAIVGGA IIPPLQGLLY GEANSGLQTS FIVPLICYVY IMYYGFVGSK PKRLS
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