Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0769 |
Symbol | pldA |
ID | 4184139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 869496 |
End bp | 870143 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070775 |
Product | outer membrane phospholipase A |
Protein accession | YP_677396 |
Protein GI | 110637189 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2829] Outer membrane phospholipase A |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAATA TCCGGGCGGC TTGTGTATTA CTTTTATTGC CGGTCAGCGT GTGTTTTGGA CAGGCAAAAA AAATACCGCG CGATTCTATT ACCCGTATCC TGAAAAGCCA GCCTTCCTTT TCCGTTTATA AAGACAATTA TTTTATAACC GGTACAACGG TAGAAGAAAA ACCCTCGAAC TATAATTCCG ACATTAAAAT GCAGATCAGC TTTAAGCAGC GCTTAAGCAA TTCTGTTATG CCGTTCAAAA GTTATTTGTA TTTAACCTAC ACACAAAAAT CGTTCTGGAA AATCTATCAG CACTCAAGTC CGTTTGAGGA AACCATTTTT AATCCCGGTA TTGGTTTGGG GAAATTCATC TTTAAGGAAG GCCGGCATAT TGGCTTCGGT ACCTTGCAGC TGGAACATGA ATCCAACGGA ACCGACAGTA TATTTTCCAG AAGCTGGAAC TCGTTATCTG TAAGTTACCT GGCAATTATG TCTGAAAAAT TTTCAATACT CGGAAAATTC TGGATACCTT TTTCTCTTTC AGATAATACA AACCTTACCA ATTATATTGG ATATGGAGAA ATAACACTCG ACTGGGAATT TGTAAAGAAC AAATTTGATG CAAACATCAT ATTCGCAAGG GGGCACAATT CGATTTAA
|
Protein sequence | MKNIRAACVL LLLPVSVCFG QAKKIPRDSI TRILKSQPSF SVYKDNYFIT GTTVEEKPSN YNSDIKMQIS FKQRLSNSVM PFKSYLYLTY TQKSFWKIYQ HSSPFEETIF NPGIGLGKFI FKEGRHIGFG TLQLEHESNG TDSIFSRSWN SLSVSYLAIM SEKFSILGKF WIPFSLSDNT NLTNYIGYGE ITLDWEFVKN KFDANIIFAR GHNSI
|
| |