| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0737 |
|---|
| Symbol | |
|---|
| ID | 4185681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 832848 |
|---|
| End bp | 833801 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638070743 |
|---|
| Product | cation efflux system protein |
|---|
| Protein accession | YP_677364 |
|---|
| Protein GI | 110637157 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.338743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGAGA ATTTTTATCC TCATTTATTC CTTGTTCCAT TTTTTACCTT ACCTTTAAAT
AAAAAACAGC TTATATTTAA AGGTATGACA GATGAACAGA CAGCTGTAAA AGCAACATAC
TTTAGCATTA TTGGAAATAC AAGCCTGGCC ATTATTAAAT GGCTGGCAGG ATTTTTTGGT
AATTCGCATG CATTGATCGC AGATGCAATT GAATCAACAT CCGATATTTT TGCATCCATG
CTTATTTTAT TCGGTATTAA ATTTTCTCAC AAACCTGCAG ACAATAAACA TCCATATGGA
CACGGACGTA TTGAGCCGCT GATCACCTTT TTGGTTGTTG GTTTTTTGAT CAGTTCATCT
GTAATCATCG CTTACCAAAG CATTATTAAT ATTCAGACAC CCCATGAATT GCCGGAGGCG
TGGACACTTA TTGTTCTGGC AGGAATTATC ATCTGGAAAG AAATATCCTA TCAGATTGTT
ATCAAAAAAA GTAAACAAGT AAACAGTTCT TCATTGAAAG CAGATGCGTG GCACCACCGA
AGCGATGCCA TTACATCAGT AGCCGCATTC ACAGGTATTT CAACGGCATT GTTGTTGGGC
AAAGGCTATG AAGCCGCAGA TGATTGGGCA GCATTATTTG CCGCATTGTT TATACTATAC
AACAGTTACC TGATTTTCAG GCCAGCCCTG GGGGAAATTA TGGACGAGCA ATCGTATGAC
GATCTCATCA TCCAGATCCG TGAAGAAGCG CTAAAAGTAC CGGGCATATT GAGTACAGAA
AAATGTTATG TACGCAAAGC CGGAATGCAA TACCATGTAG ACCTTCATGC TGTTATAGAT
GGTAATATCA GCGTGAAAGA AGGACATGCG ATTTCACATC TGTTAAAAGA TACGCTGAAA
GAAGCATTGC CACAGTTAGG AAATATTTTA ATTCATATTG AACCGGCTGA ATAA
|
|---|
| Protein sequence | MPENFYPHLF LVPFFTLPLN KKQLIFKGMT DEQTAVKATY FSIIGNTSLA IIKWLAGFFG
NSHALIADAI ESTSDIFASM LILFGIKFSH KPADNKHPYG HGRIEPLITF LVVGFLISSS
VIIAYQSIIN IQTPHELPEA WTLIVLAGII IWKEISYQIV IKKSKQVNSS SLKADAWHHR
SDAITSVAAF TGISTALLLG KGYEAADDWA ALFAALFILY NSYLIFRPAL GEIMDEQSYD
DLIIQIREEA LKVPGILSTE KCYVRKAGMQ YHVDLHAVID GNISVKEGHA ISHLLKDTLK
EALPQLGNIL IHIEPAE
|
|---|
| |