Gene CHU_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0729 
Symbol 
ID4186027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp827203 
End bp827937 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID638070735 
Producthypothetical protein 
Protein accessionYP_677356 
Protein GI110637149 
COG category[S] Function unknown 
COG ID[COG3698] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.870301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG TAAAATTACT ACTCTCAGCT CTTATACTTG TTGCAGCTCT TGCTGCATTT 
ACGTTTCACC AGCAGCAGGA TACTATTGAT GTGATCTCGT ATACGGTTGA TCCCCAAAAA
GACAACCTGC AATTTTACTG GAAAAATGAT AACGGAGAAA TTCTTAAAAG CATTAAAAAA
TTAAAAGCAT ATGTAGAAAG CAAAGGTTCT ACCTTACTTT TTGCAACCAA TGGCGGCATG
TATAAAGAAG ACCGCTCGCC GCTGGGTCTT TTTATTCAGA ATGGAAAAAC AGTAACTCCT
TTAAACAAAG CCAAGGGGCA GGGTAATTTT TATATGCAAC CCAACGGTGT ATTTTATATT
ACAAATGATA ATGAAGCAGT CATCTGTAAA ACAGAAGATT TTATTAATAA CGGAAATATA
AAATTTGCGA CACAATCCGG TCCCATGATT ATTGTTAATA ATCAGATTCA TCCATCCTTT
ATCAAAGGCT CAAAAAACCT GAACATCCGG AATGGTGTTG GCATTCTGCC GAATAAAAAA
ATAATTTTTG CTATGTCAGA AAAGGAAGTT AATTTTTTTG ATTTCGCTTT ATACTTTCAA
AACCTGGGCT GTGAAAATGC ACTTTATCTG GATGGCTTTG TTTCAAGATC CTATTTACTG
GAAAAGAAAT GGCTGCAGAC GGATGGCGAA TTTGGTGTTA TGATCGGTGT AACGGAGAAG
AACGAAGTGA AATAA
 
Protein sequence
MKRVKLLLSA LILVAALAAF TFHQQQDTID VISYTVDPQK DNLQFYWKND NGEILKSIKK 
LKAYVESKGS TLLFATNGGM YKEDRSPLGL FIQNGKTVTP LNKAKGQGNF YMQPNGVFYI
TNDNEAVICK TEDFINNGNI KFATQSGPMI IVNNQIHPSF IKGSKNLNIR NGVGILPNKK
IIFAMSEKEV NFFDFALYFQ NLGCENALYL DGFVSRSYLL EKKWLQTDGE FGVMIGVTEK
NEVK