| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0720 |
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| Symbol | pdh |
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| ID | 4186018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 819612 |
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| End bp | 820793 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638070726 |
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| Product | proline dehydrogenase |
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| Protein accession | YP_677347 |
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| Protein GI | 110637140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT TACACACTAT TAATTTCAGC GATACTGCTA TCGCATTTGC TTCAAAATCA
ACGAAGGAAT TGAAACACAT GAAGTTTCTT TTCCGCACGA TGGCATGGAG CAAGATCACA
AATATAAGTG TTTCTTTCTT AAAATTCGCA TTAAAGTACC ATTTTCCCAT CAAAAATATT
GTCCGAAATA CCCTCTTTAA ACAATTTTGC GGCGGCGAAA CCTACTGGGA ATGTGGTACA
ACCATGGAGA AACTGCATGC ATCGGGCATT TTTTCTATCC CGGATTACAG CGTGGAAGGC
AAGGAAGATG AAGCATCTTT CAATCAGACA GTCAAAGAGT TAGTGAAAGG AATTGAGCTC
GCAGCGGGTC TTCCGATGGT ATCTTTTTCA GTGTTTAAAA TGAGTGGAAT TGCGCGTTTT
GCTTTGCTTG AAAAGATTCA GCGCGGTGAG CAACTTTCGG CAGATGAAAG CAAAGAATTT
GATCGGGTGA AAGAGCGTGT AACACGATTG TGTTTTGAAG CTGAAACGCA TAATGTGCGC
CTGATGGTTG ATGCCGAAGA AACATGGATA CAAACGGCTA TAGATGTGTT GTACGTTGGA
TACATGAAGC GTTTCAATGC ACAGCGCCCG ATTCTTTTTC TTACCATACA GCTGTATCGC
AAAGATGGAT TGGAGCGTTT AAAAAACATG TATGCACAGG CACAAAAAGA AGGATATCAC
ATAGGTTTTA AGCTGGTGCG CGGCGCGTAT ATGGAAAAGG AACGGGCACG GGCAAACGAA
CTAAAATATC CGTCCCCGAT AAATGATACA AAAGAACAGA CCGATGCGTT GTACAACCAA
GCCGTTTCGT TTTGTCTGCA CGAAGATATT GCAACCTGCA TTGCCACACA CAACCAGCTG
AGCATTGAAA GAGCTGTGCG TGAGATGGAT CCCAAAGACC AGCAGATATC AGGTTTTGCG
CAGCTGTATG GTATGGGAGA TTTTCTGAGT TACAACCTGG CACATGCAGG ATACAACGTT
TCAAAATATC TGCCGTATGG TCCGCTGCGT GAAGTGATGC CCTATCTGTT CAGAAGAGCA
GAAGAAAATA AATCCATCAC CGGCGAAACA ACACGTGAGT TATTTTTTAT TGAGAAAGAA
TTGAAGAGGC GAAAGGCAGC AGGCTTTAAG CTTAAAGCTT AA
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| Protein sequence | MKTLHTINFS DTAIAFASKS TKELKHMKFL FRTMAWSKIT NISVSFLKFA LKYHFPIKNI
VRNTLFKQFC GGETYWECGT TMEKLHASGI FSIPDYSVEG KEDEASFNQT VKELVKGIEL
AAGLPMVSFS VFKMSGIARF ALLEKIQRGE QLSADESKEF DRVKERVTRL CFEAETHNVR
LMVDAEETWI QTAIDVLYVG YMKRFNAQRP ILFLTIQLYR KDGLERLKNM YAQAQKEGYH
IGFKLVRGAY MEKERARANE LKYPSPINDT KEQTDALYNQ AVSFCLHEDI ATCIATHNQL
SIERAVREMD PKDQQISGFA QLYGMGDFLS YNLAHAGYNV SKYLPYGPLR EVMPYLFRRA
EENKSITGET TRELFFIEKE LKRRKAAGFK LKA
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