Gene CHU_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0717 
SymbolaroA 
ID4186015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp816075 
End bp817322 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content44% 
IMG OID638070723 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_677344 
Protein GI110637137 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCT CTGATACAAC GGCACAAGCC TTTCACATCA CACATACTTC CGGTGTTGTA 
AATCATACCA TCACGCCTCC TGCTTCTAAA AGCGAGAGTA ATCGTGTATT GGTGATCGAT
GCACTTACGG GAAGAAAATC ACAATTAGAT AATTTATCCA ACGCGCGCGA TACACAAACG
ATGATCCGTT TGTTAGACTC CGACAGCAAT CCTGTCTGGG ATGTACTGGA TGCCGGCACC
ACCATGCGTT TCTTAACAGC ATTCAGTGCC TTCAACGGCA AGCCGCGTGA AATGACAGGC
ACGCCACGTA TGAAAGAGCG TCCGATCAAA TTACTGGTTG ACGCCTTACG TGAGCTTGGT
GCTGTGATTG AATACAAAGA AAAAGAAGGT TACCCGCCTA TTCTCATTCA TCCGTTCAAA
CCGGAATTAG CAAAAACAGA TTACATCAAG ATCAAAGGTG ATGTGAGTTC GCAATACATC
ACCGCCTTGT TGATGATCGC ACCTGTACTA CCAAAAGGTT TAACGATCGA ATTGTTAGGG
CACGTAGGTT CGAAGCCATA TATTGAAATG ACGTTGCGTT TGATGGAACA CTTTGGCGTA
ACATCGGAGT GGAAAGACAA CATCATAAAA ATTTCTCATC AGACATACAA ACCGGCTCAG
TATAAAGTTG AATCAGATTG GTCTGGTTCC AGCTACTGGT TCAGTGTGGC GGCGCTTGCA
AAAGAAGCCA ACATTGAATT GAAAGGCTAT GTTAAAAATT CACTTCAAGG TGATCACGTG
ATTGTTGACA TCATGGATCA GTTGGGTGTG AAGACAGAAT TCACTGCAGA CGGATTAAAA
CTAACCAAAC AGCCTGTTAA AGGAAACTTA GTTTGGGATT TTACCGACTG TCCGGACCTG
GCACAAACAG TTGCTGTGAT CCTTGCAGCC AAAGGTGTAG AAGGAACATT AAGCGGATTG
CAAAGTTTAC GTATCAAAGA AACGGATCGT ATTGCAGCGA TCCAGAATGA ACTGCGCAAG
TTTGGTGCAG ACATGATCGA GATTGAAAAA GATGTTACCT ATAAAGTTGT GCCGGGTACC
TTCAAGGTAG ACGGACAATC GGTACATACC TACGAAGATC ACCGCATGGC AATGGCGTTT
GCGCCGCTTG CCTTGTTAGG TAAGGTAACA ATCGAAGAAC CATCGGTAGT AAACAAATCC
TACCCGTTAT ACTGGGAAGA TTTGAAGAAG GTGGGATTTA TGTTCTGA
 
Protein sequence
MQASDTTAQA FHITHTSGVV NHTITPPASK SESNRVLVID ALTGRKSQLD NLSNARDTQT 
MIRLLDSDSN PVWDVLDAGT TMRFLTAFSA FNGKPREMTG TPRMKERPIK LLVDALRELG
AVIEYKEKEG YPPILIHPFK PELAKTDYIK IKGDVSSQYI TALLMIAPVL PKGLTIELLG
HVGSKPYIEM TLRLMEHFGV TSEWKDNIIK ISHQTYKPAQ YKVESDWSGS SYWFSVAALA
KEANIELKGY VKNSLQGDHV IVDIMDQLGV KTEFTADGLK LTKQPVKGNL VWDFTDCPDL
AQTVAVILAA KGVEGTLSGL QSLRIKETDR IAAIQNELRK FGADMIEIEK DVTYKVVPGT
FKVDGQSVHT YEDHRMAMAF APLALLGKVT IEEPSVVNKS YPLYWEDLKK VGFMF