Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0710 |
Symbol | |
ID | 4186008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 809628 |
End bp | 810656 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638070716 |
Product | hypothetical protein |
Protein accession | YP_677337 |
Protein GI | 110637130 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.229105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA CAATTGTATT AACACTGTTA TTTGCTCTTT TGCAAATAAC CATTACTTCA TGTCAGACAA CAGCAATGGA AACAGAAAAA TTTGAATGGC TCCCGGGCGT AGGTGCACCC AAAGGGTATC CCGTACGCAT ACACAGCGGA GATTTTTATA ATGGCACTAC CTGGGTAAGC ATACCCAATG GAGGAATTTT AGAAGAAGGC TGGGGCGCAG ATGGCATGAC CATGGCTGTA GGCGAAGATT TCAAACCCAT ACCGGAACGT TTTAAAATCA CTTATTTATC TTTTATAGAA AACCAGTTTT ATACCGGAGA GTTTATATTT CCGCATGACA GCGTAGTCAA ATTATTTAGA GAAGAATTTA ACAATAGTCC TTATGTTCCT AAAGAATCTT TTCGATCTAT TATTTTAGGA TTTGCACCTG GAGGAATGAT TGTTATATGG CTTAGATCTT CCGAAAGGCA AATTGAAGTT GGCAGATATC AGGCAACAAA AACCGATATG GACTGGGAGT TTTTCAATCC GCAGGGCGAA GAAGACAGAA ATAAATATGT GAATTATGTA TTAGGAAGAC GACCGGAAGC ATTAAAACAC AAAGAAGAAG GATTTAAATT TGACTTATGG GATAGTTATC GAATAAGATA TAACTGGCGA CCTAAAATTA TATTAAGTGA AAATTCGCGC CTGCATGAAA TATTCCTAAT CCAATTCAAT GCAGAATTTG AACACATAAC AGGTGAAAAA TTAACCAAAA ATTCATCCCA AAAAAGAGCT ATTCCACATG ATATTCTTTT CAGATATTAT GATGCCGCGG GGAATAAATT TGCCGGGGAA TATTTTTTTG ATGAAAAAGA AATTTTCAAT GCATATAAGG AAGTTTATAA AAACAATCCG GATCAGGAAG TAGAATTTGT ATTTGAATTA AGTTCGGATA AAACCAAATT TATCATTTAT CTAAAAAATA CTACTGAACA GATTGCACTT TTAAAGTGCA GAGGCAAAAT TAATAGATCG AGCGATTGA
|
Protein sequence | MKKTIVLTLL FALLQITITS CQTTAMETEK FEWLPGVGAP KGYPVRIHSG DFYNGTTWVS IPNGGILEEG WGADGMTMAV GEDFKPIPER FKITYLSFIE NQFYTGEFIF PHDSVVKLFR EEFNNSPYVP KESFRSIILG FAPGGMIVIW LRSSERQIEV GRYQATKTDM DWEFFNPQGE EDRNKYVNYV LGRRPEALKH KEEGFKFDLW DSYRIRYNWR PKIILSENSR LHEIFLIQFN AEFEHITGEK LTKNSSQKRA IPHDILFRYY DAAGNKFAGE YFFDEKEIFN AYKEVYKNNP DQEVEFVFEL SSDKTKFIIY LKNTTEQIAL LKCRGKINRS SD
|
| |