| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0702 |
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| Symbol | pobR |
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| ID | 4186477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 799988 |
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| End bp | 800869 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638070708 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_677329 |
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| Protein GI | 110637122 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.737092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATA AACCCGAACA TATTCCTGTT TATTCCATTG ATAAGTTTTC AAAAAAAACG
GCCGATGGTG CGCAATACAA TGTTGAAATT TTTAATAAAG ACCGAGATTT CAAAGTTGCC
TATCCGCACC GCCACGATGA TTTCTATGAA ATTCTATTTA TAACAAAAGG CACCGGCACG
TATATTATTG ACCTGCAGGA ATACGAGATC AAACCAAACA CCGTATTCTT TCTGTCTCCG
GGGCAAATCC ATGAAATTTC TTTCTCACCG GATATTTACG GATACATCTT TTTATTCAGC
TCCGGTTTTT ATTTATCCAA TAAAAATGAT CCGTATAAAT TATTTGAGTT CCCTTTTTTC
TATTCGCTGC AATACAATAA TCCACCGTTG TATTTAACAA AAGCAAGCGC TATCGAAGAA
CTTGATTCGT TATTTAAAAA AGCAATCCTT GAAGTAAATA CAGATGCCTT AGACAGTCAG
GAAGCAACGC ACGCCTTACT GGATCTGATC CTGATCCAAT GCAAACGCCT GTATCCACAG
GCAGACGGAA CGCAATTAAA AAAAGGACAC ATTTTAATTA AACGTTTCAA ACAACTGATC
GAAGAAAAGT GCACGGAGAA CATTGGCGTA AAAGAATACG CCGACATGCT GCATGTAACG
GCCAATCATT TAAGTGAAAC GGTAAAAGAA TTTACCGGAC GTACGCCAAC GGATTTTATC
AACGACCGGA TGACACTTGA AATAAAGCGG CTCTTAACAC ATACGCAACT AACGGTGCAG
GAAATTGCCT TTCAACTGCA TTTTTCAGAT CAATCGTATT TTTCAAAGTA TTTTAAAAAG
ACCAGCGGTG TGTCGCCGAC CGAATACAGG AAGATTGTCT GA
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| Protein sequence | MKHKPEHIPV YSIDKFSKKT ADGAQYNVEI FNKDRDFKVA YPHRHDDFYE ILFITKGTGT
YIIDLQEYEI KPNTVFFLSP GQIHEISFSP DIYGYIFLFS SGFYLSNKND PYKLFEFPFF
YSLQYNNPPL YLTKASAIEE LDSLFKKAIL EVNTDALDSQ EATHALLDLI LIQCKRLYPQ
ADGTQLKKGH ILIKRFKQLI EEKCTENIGV KEYADMLHVT ANHLSETVKE FTGRTPTDFI
NDRMTLEIKR LLTHTQLTVQ EIAFQLHFSD QSYFSKYFKK TSGVSPTEYR KIV
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