| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0693 |
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| Symbol | def |
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| ID | 4186468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 792130 |
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| End bp | 792684 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638070699 |
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| Product | peptide deformylase |
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| Protein accession | YP_677320 |
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| Protein GI | 110637113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTATC CGATTGTGGC ATACGGGGAT CCTGTGTTGA AGAAAGTTGC CCAAGACATT
GAAAAAGGAA GCCTGGATGT TGTCAAGATG TCTGCAGACA TGTTTGAAAC AATGGAAAAC
GCGCATGGCG TTGGCCTTGC TGCGCCTCAG GTTGCATTAA ACCTACGCAT GTTTGTTATT
GATACTTCCG TTTTCGACGA TGAAAAAATA ACTCCTGTTC GTAAAACATT TATAAATCCG
GTTATTGAAG AAGAGTGGGG CGATGAATGG CCGTATGAAG AAGGTTGCCT GAGTATTCCC
GGGGTACGTG CAGACGTATA TCGTCCGGCG AATCTTCGGA TCCGTTATTT CGATACCGAT
TGGAAAGAAC ATGTGGAAGA ATTTGACGGC ATGACAGCCC GTGTGATCCA ACATGAATAC
GATCACATTG AAGGCGTATT GTTTGTCGAC CATTTATCTT CGATCAAAAA ACGGTTATTA
AAAGGGAAAC TAACCAACAT CAGTAAAGGC GATTGCGACG CATCGTATCG TATGAAATTC
CCGATTAAAA AATAA
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| Protein sequence | MIYPIVAYGD PVLKKVAQDI EKGSLDVVKM SADMFETMEN AHGVGLAAPQ VALNLRMFVI
DTSVFDDEKI TPVRKTFINP VIEEEWGDEW PYEEGCLSIP GVRADVYRPA NLRIRYFDTD
WKEHVEEFDG MTARVIQHEY DHIEGVLFVD HLSSIKKRLL KGKLTNISKG DCDASYRMKF
PIKK
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