| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0689 |
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| Symbol | ctpA |
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| ID | 4184098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 788686 |
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| End bp | 790272 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638070695 |
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| Product | C-terminal processing peptidase-3 |
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| Protein accession | YP_677316 |
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| Protein GI | 110637109 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.567603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGATCT TTTTAGCATT GGCAGTAATC TGTGGAATTT TTATTGGTGC TGCTTTATCT
AAAAAGGGCA CGGAACAAAA TATCGCCGGC AATTATTTAC GCTTTGCAGA AATATTAAAT
TATGTACAGC AGGATTATGT AGATACAGTA GATGTCGATA AGCTCGTTGA TTATTCCATC
AGCCAGATGC TGGAAAAATT AGATCCTCAT ACTTCCTACA TCCCGGCAAG CGAACGTCAG
ATCGCGGATT CTCATTTAGA GAGCGATTTT GAAGGTATTG GTATTGAATT CAATATTATA
AAAGATACCA TCTATGTTGT TTCTCCTATC AGCGGCGGCC CATCTGAAAA GGCGGGTTTA
ATGGCTGGCG ATAAAATTAT TAAAGTAGAT AGCATACAAA TGGCAGGTAA CGGTGTTACG
TCTGCAGATG TATTCAAACG GCTTCGCGGT AAAAAAGGAA CAAAGGTTTT GCTGACTGTA
AAACGCAGCA ACTCCAGCAA ACTGCTTACG TACACCATCA TCCGGGATAA AATACCAACG
TATTCCATTG ATGCTGCTTA CATGATCGAT AAAACAACTG GTTATATCAA GATCAGCCGT
TTCGGTGATA AAACCTACAA TGAATTTTTA ACTGCCTTGA CAGACCTGAA AACACAAGGT
ATGCAGCGAT TAATGATTGA TTTGAAAGAC AATGGCGGCG GTTACCTGGA TCGTGCAACA
AACATTGCCG ATCAATTAAT TGATGGTAAT AAAATGATTG TATATACAAA TGGTAAAGGA
ACAAAATACG ATCAGGAAAT ACGTGCACGT GTTACAGGTG CATTTGAAAC AGGTCCGGTA
GTTGTATTGA TCAACGAAGG CAGCGCATCT GCCTCGGAAA TTCTTTCAGG TGCCTTGCAG
GATAACGACC GCGGATTAAT CGTGGGCAGA AGATCCTTTG GAAAAGGTTT GGTACAGATG
CCGATCAACT TAAATGACGG ATCTGAATTG CGTCTGACGA TCTCCCGGTA CTATACTCCA
AGCGGCAGAA GCATTCAGAA GCCATATGAT AAAGAAGATG CATCGGCATA TGAATCTGAT
CTGTTGTCGC GTTATGAACA TGGCGAGTTC TTCCATGCAG ACAGTATTCA CTTTAATGAC
TCGTTAAAAT TCAAAACATT AAAAGGAAGA ACCGTATATG GCGGCGGCGG TATTATGCCG
GATGTATTTG TAGGAAGAGA CACATCTGAG TACACAAAAT ATTTAATGGA ACTGTTTAAT
CAGAACGTGA TCAGAGAGTA TACATTAAAT TACTATCAGA CAAATAAAGC AGCGCTTACA
AAAATGACAT TTGAAGAATA TTTCAAATCG TTTACCGTAA CAGAGGCGAT GCTGAAAGAT
ATGCTTGACC TTGCTGCTAA AACCGGCGTT AAATATAATG AGGTTCAATA CAAACGTTCA
AAAGATTTCA TTAAAAATAA CATAAAAGCC TATATTGCCC GCAGTGCTTG GGGAAACAAA
GGATTCTATC CGATCTATAA CCAGAAAGAT GAAATCTATA ACAAAGGCTT GAATGCATTT
AAAGAAGCGG AAAAAATATC TCAATAA
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| Protein sequence | MPIFLALAVI CGIFIGAALS KKGTEQNIAG NYLRFAEILN YVQQDYVDTV DVDKLVDYSI
SQMLEKLDPH TSYIPASERQ IADSHLESDF EGIGIEFNII KDTIYVVSPI SGGPSEKAGL
MAGDKIIKVD SIQMAGNGVT SADVFKRLRG KKGTKVLLTV KRSNSSKLLT YTIIRDKIPT
YSIDAAYMID KTTGYIKISR FGDKTYNEFL TALTDLKTQG MQRLMIDLKD NGGGYLDRAT
NIADQLIDGN KMIVYTNGKG TKYDQEIRAR VTGAFETGPV VVLINEGSAS ASEILSGALQ
DNDRGLIVGR RSFGKGLVQM PINLNDGSEL RLTISRYYTP SGRSIQKPYD KEDASAYESD
LLSRYEHGEF FHADSIHFND SLKFKTLKGR TVYGGGGIMP DVFVGRDTSE YTKYLMELFN
QNVIREYTLN YYQTNKAALT KMTFEEYFKS FTVTEAMLKD MLDLAAKTGV KYNEVQYKRS
KDFIKNNIKA YIARSAWGNK GFYPIYNQKD EIYNKGLNAF KEAEKISQ
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