Gene CHU_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0658 
SymbolglmU 
ID4185661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp755851 
End bp756591 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content40% 
IMG OID638070664 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_677285 
Protein GI110637078 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.64009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCG CACTCATTCT GGCGGCGGGT AAGGGAACGC GTATGCGATC AGATTTGCCT 
AAACCGCTTG TTCCCTTCAG AGGGAAACCT ATTGTTACAC ACATTATTGA AGCTTTTACC
GAAGCCCGCA TTACTACTAT CGCGCTTATT ATAGGATTTG AAGCTGAAAA AGTAAAAGCA
GCCATCGGAC CTGGTGTTGA TTATATTTTA CAGAAAGATC AAAAAGGTAC AGGCCATGCA
GTGATGCAAG CTGTGGAATA TGCATCCCTG GCGAATACAT CTGTTTTTGT TTTTGTTGGT
GATGCTCCAT TAATTACCGC TGAAACCATA AAAAAACTGG AAGCACATCA TCTGAAAACT
CAAGCGAGCT GCACCTTTCT CACAGCTGTT TTTGATATTA ACCTTCCTTA TGCGCGCGTT
ATAAAAAATG AGTCGGGAGT TGTAATTGCC TGTATTGAAG AAAAAAATGC AACGCCTGAA
CAACTGAAAA TTAAAGAACT TTTATCTTCT CATTTTATTT TTAAGGGCGA AGATCTGTTT
GCACTGATCC ATGAAATACC GGCAGACAAG GAGAATGGCG AATATTATTT AACAGACATC
ATTTCGCTTT TTTTATCTAA CGGAATGAAA GTTGAATCGC TGCAGATAGA TAATTATCAG
GAACTGGTTG GTTTAAATAC GCCGGAAGAT ATTGCCTGGG CGGAACAATT TACGGAGTCC
ATTAAACAAA CACAGGTATG A
 
Protein sequence
MSIALILAAG KGTRMRSDLP KPLVPFRGKP IVTHIIEAFT EARITTIALI IGFEAEKVKA 
AIGPGVDYIL QKDQKGTGHA VMQAVEYASL ANTSVFVFVG DAPLITAETI KKLEAHHLKT
QASCTFLTAV FDINLPYARV IKNESGVVIA CIEEKNATPE QLKIKELLSS HFIFKGEDLF
ALIHEIPADK ENGEYYLTDI ISLFLSNGMK VESLQIDNYQ ELVGLNTPED IAWAEQFTES
IKQTQV