Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0656 |
Symbol | |
ID | 4185659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 753740 |
End bp | 754684 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070662 |
Product | aldose-1-epimerase |
Protein accession | YP_677283 |
Protein GI | 110637076 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.629793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAA TTAAAACCGA TGACTTTGAA GGAATAGAAA TTGTAAAACT GATCAATACA GTTTCCGGAG AATATGCTTC CATCATCCCT TCCTTTGGCG GAAATATTCA TGAACTTGTT TTGCAAAAAC ATAATATTCT GCATGATGTC ATTTACACCA ATAAAAATAA AGAAGAACTT TCAGGTTTTT ATTCAAATTT ATACCGCGGT GCAAAACTCA ATCCATTCTC TAACCGCATT GATAAAGGCT CGTATATATT TGAAAATATT TCCTATTCAA TTCCGTTGAA TGATGCCGGT ATACATGCGC TGCATGGTTT TGTCTGGAAT AAACCATTCA GCATCACTGC ATCTAAAACA TCGTTTGAAT TTGCAACGCT AACCCTCTCT TACACACATC CGAAAGATTC TGCAGACTTT CCTTTTTCAT ATACGCTCCT TGTCACGTAC AAGCTTTGTA TAGAAGGTTT AATGGTTACG ACTCAGATAA CAAATACCTC GCCCACAGCT ATTCCTATGG GAGATGGATG GCATCCTTAC CTTACACTGG GCAGCAGCAT CAATACATTA AAACTGCAGA TACCTTCTGT ACAAAAAATA GAGACTACAG ATACGTTGAT TCCTACCGGG AAAATTATTG AAGACATTTC ATTTTTTGAA CCTGCTCTGC TGGGCGAACG CGAACTGGAC AACGCCTTTG TATTAGATTC TTCTGTTGAA AAAGCTGAAA CACTGCTGTT CGATGAAGAA GAGGATCTAA CACTCGTAGT ATGGCAGCAA ACAGACACCT ACCCCTTTGT ACATGTGTAT ACACCTTCTG ACCGCATGTC TGTAGCGATT GAACCATGCA GCGCTATTCC GGATGCATTC AACCGGAACA TGATTGAAAC AACGTTAAAA CCGGCAGAAA AAAAATCATA CGTATTCGGC ATACAGCTCC GTTAA
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Protein sequence | MFEIKTDDFE GIEIVKLINT VSGEYASIIP SFGGNIHELV LQKHNILHDV IYTNKNKEEL SGFYSNLYRG AKLNPFSNRI DKGSYIFENI SYSIPLNDAG IHALHGFVWN KPFSITASKT SFEFATLTLS YTHPKDSADF PFSYTLLVTY KLCIEGLMVT TQITNTSPTA IPMGDGWHPY LTLGSSINTL KLQIPSVQKI ETTDTLIPTG KIIEDISFFE PALLGERELD NAFVLDSSVE KAETLLFDEE EDLTLVVWQQ TDTYPFVHVY TPSDRMSVAI EPCSAIPDAF NRNMIETTLK PAEKKSYVFG IQLR
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