Gene CHU_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0656 
Symbol 
ID4185659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp753740 
End bp754684 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content39% 
IMG OID638070662 
Productaldose-1-epimerase 
Protein accessionYP_677283 
Protein GI110637076 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.629793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAA TTAAAACCGA TGACTTTGAA GGAATAGAAA TTGTAAAACT GATCAATACA 
GTTTCCGGAG AATATGCTTC CATCATCCCT TCCTTTGGCG GAAATATTCA TGAACTTGTT
TTGCAAAAAC ATAATATTCT GCATGATGTC ATTTACACCA ATAAAAATAA AGAAGAACTT
TCAGGTTTTT ATTCAAATTT ATACCGCGGT GCAAAACTCA ATCCATTCTC TAACCGCATT
GATAAAGGCT CGTATATATT TGAAAATATT TCCTATTCAA TTCCGTTGAA TGATGCCGGT
ATACATGCGC TGCATGGTTT TGTCTGGAAT AAACCATTCA GCATCACTGC ATCTAAAACA
TCGTTTGAAT TTGCAACGCT AACCCTCTCT TACACACATC CGAAAGATTC TGCAGACTTT
CCTTTTTCAT ATACGCTCCT TGTCACGTAC AAGCTTTGTA TAGAAGGTTT AATGGTTACG
ACTCAGATAA CAAATACCTC GCCCACAGCT ATTCCTATGG GAGATGGATG GCATCCTTAC
CTTACACTGG GCAGCAGCAT CAATACATTA AAACTGCAGA TACCTTCTGT ACAAAAAATA
GAGACTACAG ATACGTTGAT TCCTACCGGG AAAATTATTG AAGACATTTC ATTTTTTGAA
CCTGCTCTGC TGGGCGAACG CGAACTGGAC AACGCCTTTG TATTAGATTC TTCTGTTGAA
AAAGCTGAAA CACTGCTGTT CGATGAAGAA GAGGATCTAA CACTCGTAGT ATGGCAGCAA
ACAGACACCT ACCCCTTTGT ACATGTGTAT ACACCTTCTG ACCGCATGTC TGTAGCGATT
GAACCATGCA GCGCTATTCC GGATGCATTC AACCGGAACA TGATTGAAAC AACGTTAAAA
CCGGCAGAAA AAAAATCATA CGTATTCGGC ATACAGCTCC GTTAA
 
Protein sequence
MFEIKTDDFE GIEIVKLINT VSGEYASIIP SFGGNIHELV LQKHNILHDV IYTNKNKEEL 
SGFYSNLYRG AKLNPFSNRI DKGSYIFENI SYSIPLNDAG IHALHGFVWN KPFSITASKT
SFEFATLTLS YTHPKDSADF PFSYTLLVTY KLCIEGLMVT TQITNTSPTA IPMGDGWHPY
LTLGSSINTL KLQIPSVQKI ETTDTLIPTG KIIEDISFFE PALLGERELD NAFVLDSSVE
KAETLLFDEE EDLTLVVWQQ TDTYPFVHVY TPSDRMSVAI EPCSAIPDAF NRNMIETTLK
PAEKKSYVFG IQLR