Gene CHU_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0629 
Symbol 
ID4184829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp731094 
End bp732704 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content35% 
IMG OID638070635 
Producthypothetical protein 
Protein accessionYP_677256 
Protein GI110637049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.156516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.628895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA TATTTCTAAT AATCAGTGTG TGTGTATTAA ACATTTTTAC ACTGCAGGCA 
CAAAAACCTA CTATTGTTTT CAGTGCAGAC AAGACCCCGC AAAAAGATCA GGTAGCCAAG
TTAAGGATAT TAAAGAATGG CAATACGGCA AGTATTGAAC TGATTGAAGA TATTGGTATT
GTATGTAAAT TATATGATAC CAATAAAAAG AAAGTTAGTG AAGTAACAAC ACCTTTGGCT
GACAAAATAA ATAAAAGCAG ATTAAGATGT GTGTATGAAA TCAACAATGA AATTATGGTC
ATGTTGGTGA TTTTTCCTAA AGGGGTTCCA ACATTAATGA GATATTTATA TGATGGGACA
ACAGGCAAAC TAAAAAGCGA AACTTCAATT TTGGAAATGC CTGTACTTAC CGGAGATCCC
AGATATCATC TGACAGATTC GCGATATGTA CTATCTGATT ATAAAATTGT GAAAGATCCT
TCCAGTGATT ATTATGCAGT AGTATTATGC GACATATTCG CTAAAGAAAT TAATAAGCGA
ATAGAGATTG TTCATTACTC TCCTGTTCAT GAAAAAGTAA CCCGGGCATA TTTAACATTA
ATGGAAAGTC AATATAAGTA TATATCTGCT TTAGATATGT ATGTGAATGC AGGAGAGTCT
GTGATATTAG CTACGTATGG TTGCAATACG ACGAAAAAAG ACGGTGAAGG GGCAACATAT
TATCTGTCAC AACTTAAAGC AGGAGCAACC GCCTTTACAA CTAAAATACT GGCTCAGACA
AAATCATCGG AACAAACGGA AGATAATGCT GTTTGTAAGT TCATATTTGA TGCTAAAAGC
AAGCAGCTGA AAGCGCTCAT CAATATAATT GATACAGACG TATTGCATAG CCATTTCATA
ACACAAACCA TAAATCCACA AACACTCGCG TTTAATAAAC TAACGCAGGT TACAATCAAT
AAAGCATTAG ATTATTATAA AAAAAATATC AATGCCGAAA AGTTGTATAA TGAGAATGAT
ATACAGAATT ATATAATTGA TCAAAAAGGA AATGATTTTT TTCTGGTTCA GTCGGCTGGA
AGGGTTTATT CGCAATATTC ATCAGTGGTA TGGATGTCTG AAATTGCAAT AACCTCTTCT
TCACCGGATG GACAGGAGAT TTATGGACGG GCTATACCTT ATGCGAATAT GCACACTGCG
TCCCCAAAAA GGATGAGTTA TATGGATGCT CCCAAAGGTC AGTTTTTATA TCCCAATGCG
GATGAATTTT ACGGTACATA TGTGGAATTA ATTGCAGGGA AAGAAAATAA CTATATTTTA
TTAAATGATC TTCCGGAAAA ATTTGACCGG CCTGAAAACG AAAAAAGTGT AGGCGTCAAT
CTCGCGGGTA TGAACCACGA TGATCTCAGC GGATGTATTT TTACATTTAA CAGTGAAGGA
AAGATGACTA AAGACTATTT ATTCGGAAAG CCCGCTAAGG CAACGGATGC AAAGTATGCA
TTATTCCACA CAGGAGATTA CAATGCTGAA ACAGGCATGT ATGTAACGCA GGTTGTAGAA
CGTGTTAATG GTAAAAAAGT AATCAGCATT GCCTGGATTA ATTTGAAATA A
 
Protein sequence
MKSIFLIISV CVLNIFTLQA QKPTIVFSAD KTPQKDQVAK LRILKNGNTA SIELIEDIGI 
VCKLYDTNKK KVSEVTTPLA DKINKSRLRC VYEINNEIMV MLVIFPKGVP TLMRYLYDGT
TGKLKSETSI LEMPVLTGDP RYHLTDSRYV LSDYKIVKDP SSDYYAVVLC DIFAKEINKR
IEIVHYSPVH EKVTRAYLTL MESQYKYISA LDMYVNAGES VILATYGCNT TKKDGEGATY
YLSQLKAGAT AFTTKILAQT KSSEQTEDNA VCKFIFDAKS KQLKALINII DTDVLHSHFI
TQTINPQTLA FNKLTQVTIN KALDYYKKNI NAEKLYNEND IQNYIIDQKG NDFFLVQSAG
RVYSQYSSVV WMSEIAITSS SPDGQEIYGR AIPYANMHTA SPKRMSYMDA PKGQFLYPNA
DEFYGTYVEL IAGKENNYIL LNDLPEKFDR PENEKSVGVN LAGMNHDDLS GCIFTFNSEG
KMTKDYLFGK PAKATDAKYA LFHTGDYNAE TGMYVTQVVE RVNGKKVISI AWINLK