Gene CHU_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0626 
Symbol 
ID4184826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp727740 
End bp728930 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content39% 
IMG OID638070632 
ProductNa(+)/H(+) exchanger family protein 
Protein accessionYP_677253 
Protein GI110637046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.741976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTT TAATCACTGT TTGCGTTCTT TTGCTGTTAG CGTATATTTT TGATTTAACA 
GCATCGTTCA CCAAAATCCC TTCTGTCATT CTGCTGCTGG TATCGGGCTG GCTGGTTAAA
CAGGCGTGCC ACGCGCTTAA AATTAACGTT CCGGATCTTG ATCCTTTATT GCCCGTTCTG
GGAACAGTAG GTTTGATCCT TATTGTACTG GAAGGCTCGC TGGAATTGGA AGTGGATAAA
ACAAAATTCC CGATGATTAA AAAATCCATT GCCGTTGCCT GTATTCCTAT GGTTGTACTG
GCGCTTTTAC TGGGTTATTT TTTTAAGCAT GTAGGCGGGT ATACATTAAA AGATAGCATT
ACATATGCGA TTCCTTTTTG CGTGATCAGC AGTGCTATTG CCATTCCGAG TGTTTCAGGA
CTTCATTCAC GTGTGCGTGA ATTTGTGGTT TTTGAAACAA GTATGTCAGA TATTTTAGGC
GTATTGTTCT TTAATTTTGT TGCATTGAAT GCGGTTATTA ACACAGATTC GCTGATCGAA
TTTTTTATTC AGATTGTTGT AATCACCGTA CTGTCATTTA TTGCAACGAT CTGCTTGTCG
TTGCTGCTTA CAAAAGTGAA CCATCACATC AAATACAGTC CTATCATCAT CATCATCATT
TTATTCTACG GCATTTCTAA GATATATCAT TTACCCGGTC TTGTCTTTAT TATTATTTTT
GGTTTGCTGC TAGGCAATAT AAAGGAATTG AGTAAACTTA AATTTTTACG TAAAATCCAA
TATCAGGCAA TTGAAACAGA AGTTAAAAAG CTGCACGAAC TTAGCATTGA AGCTGCTTTC
CTGATCCGCT CCTTGTTCTT TTTGTTGTTC GGATTTCTTA TGCATACAAG AGAAGTACTG
AACCCGGATA CTATTCTGTA TGCATTGGGT ATTGTAGCAG CAATTATAAT TATCCGGTTG
CTGCAGCTGG CATTTTATAG AATACCGCTT GTGCCAATCC TGTTTATAGC ACCACGCGGC
TTGATTACTA TTTTACTTTT TGTGGCCATT ATTCCAGAAC CCACTGGCTC TGTTGTAACC
AAATCACTGG TGATTCAGGT GATTGTTATT TCGGCGCTGG TGATGATGCT GGGATTGATG
CTTACACCGA AACAAATGCT TGCAGAGAGT CAGCACGAGA AATTAAGGTA A
 
Protein sequence
MSILITVCVL LLLAYIFDLT ASFTKIPSVI LLLVSGWLVK QACHALKINV PDLDPLLPVL 
GTVGLILIVL EGSLELEVDK TKFPMIKKSI AVACIPMVVL ALLLGYFFKH VGGYTLKDSI
TYAIPFCVIS SAIAIPSVSG LHSRVREFVV FETSMSDILG VLFFNFVALN AVINTDSLIE
FFIQIVVITV LSFIATICLS LLLTKVNHHI KYSPIIIIII LFYGISKIYH LPGLVFIIIF
GLLLGNIKEL SKLKFLRKIQ YQAIETEVKK LHELSIEAAF LIRSLFFLLF GFLMHTREVL
NPDTILYALG IVAAIIIIRL LQLAFYRIPL VPILFIAPRG LITILLFVAI IPEPTGSVVT
KSLVIQVIVI SALVMMLGLM LTPKQMLAES QHEKLR