Gene CHU_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0620 
Symbol 
ID4184820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp723469 
End bp724509 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content41% 
IMG OID638070625 
Producthypothetical protein 
Protein accessionYP_677247 
Protein GI110637040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA TTTCTAAAAA GAAAATCGTT TATAAGATCG GAAAGCCTTT GCGTAAGTAT 
CTCTTTCAGT TTGACAGAGA GCAGAAAGTA CCCTTATCCT ATACGGATCT AACCCGGTTT
ACCAGCCGCA TTTCGTTAAA GGATCGCTAT GGGAAAGATA CCTTGTGGGA CAGTGTGTAT
TACAGCAATT CCGATATGGT GGAAATATAC GATGGTTTAA AACGTATCTA TGCAGTGCTT
AAGATCGGCG GAGATCTGAG TGTAACCGAA CACTTGTTCA TTGACCGTAT TGACCTCTGC
GTGTATGGCA ATACAAAGCC CTTTCGCGTA CGTGTGGTAA ACCGGATCAA CGATAACTAC
GATTATTTTT ATGTGAAGGT GGCAGATGCT TCGAGGGTAT ACGGTCTGGA GCTGGAGCAT
ATTTTATCGC CTAACAACAT CAGTTATTTA ATAGACGGTG ATACGTTGAT CGAAGATCAT
ATTGTAGGCA TACCGGGCGA TATGTTCATC AATCAGTATC TGAAATTAAT GACGCTGAAT
AAAATCCGTC TGGCAAAAGA ATTTGTAAAA TTTAACGAAC GCTGCTTCAT CCGTTTGCTG
GGCGATATGC ATTCCAGTAA TTATGTCGTA GAGATGACCC CCGATTTCGA AGAATTTCAT
TACCGGATCC GGGCAATCGA TTTTGACCAG CAATGTTATG AAGGTGCCAA ATGGGTATAT
CTACCTCAAT TCTTCAAACA GAATAATACA CTGATCGATA TTGTTAAGGA AGTATTAAGC
GAAGAAAGTA TTCAGCAATA TCAATTTGAG GAACGTGCCA TGATGGCATC CAGATTACGG
GCAAATAAAT ACCGGATCAA AGGGCTCTGG GATGCCGTGA TGCGTGATAC CATTGCACCC
CAATCGCATG TGGAAAAATT GAAAAATGAG CTGGCAAAAC ATTACAATGA CCCTGATTTT
CTGAAGTGTA AGCAAATGGG CGCACTCATC CGTACCAGTT TATATAGGTT ACTGAAAGAC
ACCCGTGTGC GTAAAAAATA G
 
Protein sequence
MSEISKKKIV YKIGKPLRKY LFQFDREQKV PLSYTDLTRF TSRISLKDRY GKDTLWDSVY 
YSNSDMVEIY DGLKRIYAVL KIGGDLSVTE HLFIDRIDLC VYGNTKPFRV RVVNRINDNY
DYFYVKVADA SRVYGLELEH ILSPNNISYL IDGDTLIEDH IVGIPGDMFI NQYLKLMTLN
KIRLAKEFVK FNERCFIRLL GDMHSSNYVV EMTPDFEEFH YRIRAIDFDQ QCYEGAKWVY
LPQFFKQNNT LIDIVKEVLS EESIQQYQFE ERAMMASRLR ANKYRIKGLW DAVMRDTIAP
QSHVEKLKNE LAKHYNDPDF LKCKQMGALI RTSLYRLLKD TRVRKK