Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0615 |
Symbol | lpxH |
ID | 4184815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 717412 |
End bp | 718197 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070620 |
Product | UDP-2,3-diacylglucosamine hydrolase |
Protein accession | YP_677242 |
Protein GI | 110637035 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCATC AAATTGAATC TGTTCAGGCA GGTAAAAAAA TATATTTCCT TTCCGATTTT CATTTAGGTG TTCCTTCAGA TGAAGAAAGC TGGAAAAGAG AAAAAAAGAT TATTCGATTT CTGGATTCAA TCACACCTGC AGCGCAGGCA GTTTTTTTAT TAGGTGATAT CTTCGACTTC TGGTTTGAAT ACAAACACGT CATACCAAAA GGCTTCGCAC GTTTACAAGG TAAGATCGCA CAGCTTACAG ATTCCGGCAT TCCGGTTTAT TTATATACAG GCAATCACGA CCTGTGGATG TTCGGTTATC TGGAAAAAGA ATTAGGTGTA ACTGTTTTTC ATAAACCCAT CGATTGGGAA ATTGCCGGGA AAAAATTTCT GATCGGTCAC GGAGACGGAC TCGGCCCGGG TGATTTTGTA TATAAGTGTA CCAAAAAAGT ATTTGTCAAT CCGTTTTTTC AATGGGTATT CAAAATGACT CCGCCGGCAA TTGGTATGGG AATAGCAAAA TTCTGGTCCG GTAAAAGTCG TCAGCATAAT ACCGACGATC GGTTTTTTGA AGAAAAAGAA TTTTTGTGGC AATATTGTAA AGAACAAAAC GTACTAAAAC ATAGGTCTTA TTATATATTC GGACATAGGC ATATGCCGCT GGATCTGCCG GTAGGTGATT CAGCGCGATA TGTGAACATT GGAGACTGGA TTAAATTTGA TACGTTTGCA GAATTCGATG GCAACGAGCT AAAACTTATT TCATGGAAAG AAACATCAGA GCCATATTCG CTGTAG
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Protein sequence | MIHQIESVQA GKKIYFLSDF HLGVPSDEES WKREKKIIRF LDSITPAAQA VFLLGDIFDF WFEYKHVIPK GFARLQGKIA QLTDSGIPVY LYTGNHDLWM FGYLEKELGV TVFHKPIDWE IAGKKFLIGH GDGLGPGDFV YKCTKKVFVN PFFQWVFKMT PPAIGMGIAK FWSGKSRQHN TDDRFFEEKE FLWQYCKEQN VLKHRSYYIF GHRHMPLDLP VGDSARYVNI GDWIKFDTFA EFDGNELKLI SWKETSEPYS L
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