Gene CHU_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0615 
SymbollpxH 
ID4184815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp717412 
End bp718197 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content39% 
IMG OID638070620 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_677242 
Protein GI110637035 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATC AAATTGAATC TGTTCAGGCA GGTAAAAAAA TATATTTCCT TTCCGATTTT 
CATTTAGGTG TTCCTTCAGA TGAAGAAAGC TGGAAAAGAG AAAAAAAGAT TATTCGATTT
CTGGATTCAA TCACACCTGC AGCGCAGGCA GTTTTTTTAT TAGGTGATAT CTTCGACTTC
TGGTTTGAAT ACAAACACGT CATACCAAAA GGCTTCGCAC GTTTACAAGG TAAGATCGCA
CAGCTTACAG ATTCCGGCAT TCCGGTTTAT TTATATACAG GCAATCACGA CCTGTGGATG
TTCGGTTATC TGGAAAAAGA ATTAGGTGTA ACTGTTTTTC ATAAACCCAT CGATTGGGAA
ATTGCCGGGA AAAAATTTCT GATCGGTCAC GGAGACGGAC TCGGCCCGGG TGATTTTGTA
TATAAGTGTA CCAAAAAAGT ATTTGTCAAT CCGTTTTTTC AATGGGTATT CAAAATGACT
CCGCCGGCAA TTGGTATGGG AATAGCAAAA TTCTGGTCCG GTAAAAGTCG TCAGCATAAT
ACCGACGATC GGTTTTTTGA AGAAAAAGAA TTTTTGTGGC AATATTGTAA AGAACAAAAC
GTACTAAAAC ATAGGTCTTA TTATATATTC GGACATAGGC ATATGCCGCT GGATCTGCCG
GTAGGTGATT CAGCGCGATA TGTGAACATT GGAGACTGGA TTAAATTTGA TACGTTTGCA
GAATTCGATG GCAACGAGCT AAAACTTATT TCATGGAAAG AAACATCAGA GCCATATTCG
CTGTAG
 
Protein sequence
MIHQIESVQA GKKIYFLSDF HLGVPSDEES WKREKKIIRF LDSITPAAQA VFLLGDIFDF 
WFEYKHVIPK GFARLQGKIA QLTDSGIPVY LYTGNHDLWM FGYLEKELGV TVFHKPIDWE
IAGKKFLIGH GDGLGPGDFV YKCTKKVFVN PFFQWVFKMT PPAIGMGIAK FWSGKSRQHN
TDDRFFEEKE FLWQYCKEQN VLKHRSYYIF GHRHMPLDLP VGDSARYVNI GDWIKFDTFA
EFDGNELKLI SWKETSEPYS L