| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0595 |
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| Symbol | ompA |
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| ID | 4185795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 694222 |
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| End bp | 696426 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638070600 |
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| Product | outer membrane protein A |
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| Protein accession | YP_677222 |
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| Protein GI | 110637015 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00808098 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTCC ATATATTTAT TCTGATCGCT TTGTATTTTA GTTTGAATAC CGAAACATAT
GCACAATCAA AAAGAGACAA AGATCTGATG ATTGCAGATT ATATGTATAC CCATTTAGCA
TTCGCTACAG CTATTGATCA TTATGAAAAA GTAGTAGAGC ATAACAATGA TGCTGCCATC
ATGGTTAAAC TTGCTGACTG CTATCGTATG ATTGACGAAT TTGAAAAAGC TGTTGCCTGC
TATTCTATTG CAATAAAAAG CAATTCTTTT CCTAACGCTG CTTACCCGCA TTATGCAGAA
ACATTAATGA CCTTAGGCAG ATACGAAGAA GCGAAGCAGC TTTTGATAAC GTATCAGAAT
AATAATCCGG CAAACAGAAG TATTACAAAT GAAATCAGAA GCTGTGATTA TGCCGATTCA
TTATTAAAGC TTCCTCCAAC CGGAGCCATT TACTTTGAAT CCTTTAATAC AGATGGTTTT
GAGTTTGGGC CGGCATTACG AAAAAATGAT TTAGTATTTA CAACAGATTC TGTATACAGC
ACAGAAAGTT CAAAAAAAGA TAAATGGACA GGACATTCCT TTTATCAGAT CCGTTATACG
GAGTTAAATG CAGAAGGAAG AGCAAGTGAA GCTGTTAAGA ACTTAGGTAC AAAAGTAAAC
AGTAAATACC ACGATGGACC GTGCACGTTT TGTCACGATG GTGATACCAT GTTTTTTACA
CGTACCAACA TGGGTATAAG CATGATTAAC AACGGGCCGA AATCAGATCC GAATAAACTT
GTTCATTTAC AGATTATGGT TGCGAGTAAA CAGGATCCGG ATACGAAAGA GTACAAAAAA
ATAAAACCAT TTGTACATAA CAAAAGTACA TATTCGACAA TCCACCCAAC GCTCAGTTAT
GGCGGACAAA TGCTGGTATT TGCTTCCGAC ATGCCTGGCG GCGAGGGTGG AATTGATTTG
TATATGACTA CTTTGGATGC ACGCGGCAAA TGGACAAAGC CGGTAAATTT AGGCAAGGGT
ATTAATACTG AAGGTGATGA AGTATTCCCT TCCTTTGATG GAGACAGTAT TTTATATTTC
TCATCGAATG GCTGGGTTGG ACTGGGAGGA TTGGATATAT ATAAATCAAA ATGGGATAAA
CAAAAAGGCG TATTTGTGGT ACTCAATAAT ATGGGCATCC CGGTAAATTC ATCCTATGAT
GACATGTCGT TTGTAGAATC CAGAAATGGA TCTATAGCAC ACTTTGCTTC CAACAGGCCT
GCTCCAAAAG ACAATGACAA CATCTACTCG TATGTTGCAC AGAGTATATT TCTTAAGTTG
ATTATTATAG ACGGCGCTAC AAAAAAACCA TTGGAAAACT GTTATATAGA ATTAATCAGC
AAGCCGGATG CGCGAACGCT TTCCAGTGAT AAAAACGGAA ATACTGTTAC ACCGCTGTAT
CTGCAAACAG ACTACAATGC CCGTATAAAT AAAGCCGGAT ACAGGCCTGT GGAAATTCCT
TTTTCTACCT TAGATGTTAT CGGAAACGAT ACGATTAAGA AAATAATAAA CATGCAATCT
GATTTTCAGA TCAGCTATAC AACAATTATT CTGGATGAAA AAACAAAATT TCCTATAACA
GACCCTTCCA TTGTGTGGAT TGAAAAAGAA GGAAAAAAGA AAGATACAAT AAGACTTGCT
ACCGGTGAAC AATTAAACGT TGAATTAAAA CCTAACAGCA TGTATTACAT GTATGGATTA
AAAACAAATT ATTACAGTAA ACAACGCTTT GTTTCAACAA AAGGCATTGA AAGCGGTTCT
GGCACCACAC GTATCGTTGA CACCTTATAC ATGAAAAAAC TGGAAGTAGG TGAAATCTAT
AAAATTGACG ATATCTATTA TGATTATAAT AAAGCTACTA TCCGCCAGGA TGCAAAACCA
GCGCTGGATC AACTGATGAA TTTACTGACT GAAAATCCAA CCATGAAAAT TCAGTTGAAT
TCACACACAG ATTGCAGAGG TTCGGATGTA TACAACATGA AACTTTCTCA AAACCGCGCG
CGTGCTGTAG TGACCTATTT AGTTGAAAGA GGTATCTCTG CTGACCGGTT GAAATTTAAA
GGGTATGGAG AAACATTACC TGTTACTAAT TGTGCATGTA CAGAATGTAC GGAGCAGCAA
TACCAGGATA ACAGGCGTAC TGAATTTCAG ATTATAGAAT TATAA
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| Protein sequence | MRVHIFILIA LYFSLNTETY AQSKRDKDLM IADYMYTHLA FATAIDHYEK VVEHNNDAAI
MVKLADCYRM IDEFEKAVAC YSIAIKSNSF PNAAYPHYAE TLMTLGRYEE AKQLLITYQN
NNPANRSITN EIRSCDYADS LLKLPPTGAI YFESFNTDGF EFGPALRKND LVFTTDSVYS
TESSKKDKWT GHSFYQIRYT ELNAEGRASE AVKNLGTKVN SKYHDGPCTF CHDGDTMFFT
RTNMGISMIN NGPKSDPNKL VHLQIMVASK QDPDTKEYKK IKPFVHNKST YSTIHPTLSY
GGQMLVFASD MPGGEGGIDL YMTTLDARGK WTKPVNLGKG INTEGDEVFP SFDGDSILYF
SSNGWVGLGG LDIYKSKWDK QKGVFVVLNN MGIPVNSSYD DMSFVESRNG SIAHFASNRP
APKDNDNIYS YVAQSIFLKL IIIDGATKKP LENCYIELIS KPDARTLSSD KNGNTVTPLY
LQTDYNARIN KAGYRPVEIP FSTLDVIGND TIKKIINMQS DFQISYTTII LDEKTKFPIT
DPSIVWIEKE GKKKDTIRLA TGEQLNVELK PNSMYYMYGL KTNYYSKQRF VSTKGIESGS
GTTRIVDTLY MKKLEVGEIY KIDDIYYDYN KATIRQDAKP ALDQLMNLLT ENPTMKIQLN
SHTDCRGSDV YNMKLSQNRA RAVVTYLVER GISADRLKFK GYGETLPVTN CACTECTEQQ
YQDNRRTEFQ IIEL
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