Gene CHU_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0593 
Symbol 
ID4185793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp691121 
End bp692287 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content37% 
IMG OID638070598 
Productpermease 
Protein accessionYP_677220 
Protein GI110637013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.046063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA CCATATTATT AATCATCGCG TTTCTCGCAA TCTTTGCAGA GTCCTTGTTA 
GCGCCATACT ATCCCATGTA TTTTGCGAAG GTATTCGACA TACACGATTC AAACACCGTA
GGCTGGTATA TTGGATCGTG CCGGATCGTA TTTATGGCTG CTTATCCCAT TTGGGCAGTT
ATCAGTAAGC GATATTCTCT TGGAAGCATA CTTATATGTA CACAAGGTAT GGCAGGTGTT
ATATGTATAG CCTGTGCCTA TAGCACAAGC TATGCAGTAT TTTTCGCGTT ATCGTTAGTG
ATGATTTTTT TTAAAGCAAG TTACCTGCTT ATTTATCCGC ATCTGATACA GAACAGCAGC
TCCAGATACA AAGAGATCGG TGTATTGGGA ATTATTTTAA ATGCAGGAAT GATCTGTTCT
ACGTTGGCAA GCAGCATCTG GATGGAGCAA TTTCAAATAC AATACATATT TTTAATAATA
GCAGCCTTCG ATTTTTTACA AATGATTTTC AGTTATTATT TTTTATCTGC CGATATACGA
TCTGTTGTTT CGGAAAAAAC AGCACATGCA GAACCTGCGG TTCCAGTATT TTCATTGGTA
CGGATAGGCT TGCTTACATT ATTTTTATAT CTGCTGTCAA CAACCTTACG GCCTTTTTAC
ACAGAATTTA TTTTAGGACA AACCAGATAT GCACACACTA TTTTAGAAGC CGGATGTTTA
TTCATACTAC CGAGTTTATC CGTTATTCTT TTTTATTTTA TTTTCCGAAA AGAAAATTTT
TCCAGATCAG ACATGACGAT TCTGGTTGTG GCAGGTTGCT TTGCCCTGAG TGTATATGTG
CAGCAATTTG AAACACCGTT TATACTTATC TGCTTCATTC GTATTGTGTA TGGATTTTTA
CTGTTCTATT TATGCGTATA TCTGGATCTG TTATTTTTTG AATCTGTAAG CAGTGCACAT
GTCGCAGTGT GGTACGCATT CATTCATGTC ATTCAGAATA TTGCTTACCT GACAGCACCT
TTGTATGTGG GGTATAAAAT AGGCGTGAAT GGCTTGGATG CACAATTTGA TATTGCTTTC
GTATGCGCTT TATTATTTCT TTCAATTCTT ACAGTTACAA GTATTTCATT TAAACGTAAA
ACACATAGAT ATGAATCATT CCGATAA
 
Protein sequence
MNRTILLIIA FLAIFAESLL APYYPMYFAK VFDIHDSNTV GWYIGSCRIV FMAAYPIWAV 
ISKRYSLGSI LICTQGMAGV ICIACAYSTS YAVFFALSLV MIFFKASYLL IYPHLIQNSS
SRYKEIGVLG IILNAGMICS TLASSIWMEQ FQIQYIFLII AAFDFLQMIF SYYFLSADIR
SVVSEKTAHA EPAVPVFSLV RIGLLTLFLY LLSTTLRPFY TEFILGQTRY AHTILEAGCL
FILPSLSVIL FYFIFRKENF SRSDMTILVV AGCFALSVYV QQFETPFILI CFIRIVYGFL
LFYLCVYLDL LFFESVSSAH VAVWYAFIHV IQNIAYLTAP LYVGYKIGVN GLDAQFDIAF
VCALLFLSIL TVTSISFKRK THRYESFR