Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0593 |
Symbol | |
ID | 4185793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 691121 |
End bp | 692287 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638070598 |
Product | permease |
Protein accession | YP_677220 |
Protein GI | 110637013 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.046063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTA CCATATTATT AATCATCGCG TTTCTCGCAA TCTTTGCAGA GTCCTTGTTA GCGCCATACT ATCCCATGTA TTTTGCGAAG GTATTCGACA TACACGATTC AAACACCGTA GGCTGGTATA TTGGATCGTG CCGGATCGTA TTTATGGCTG CTTATCCCAT TTGGGCAGTT ATCAGTAAGC GATATTCTCT TGGAAGCATA CTTATATGTA CACAAGGTAT GGCAGGTGTT ATATGTATAG CCTGTGCCTA TAGCACAAGC TATGCAGTAT TTTTCGCGTT ATCGTTAGTG ATGATTTTTT TTAAAGCAAG TTACCTGCTT ATTTATCCGC ATCTGATACA GAACAGCAGC TCCAGATACA AAGAGATCGG TGTATTGGGA ATTATTTTAA ATGCAGGAAT GATCTGTTCT ACGTTGGCAA GCAGCATCTG GATGGAGCAA TTTCAAATAC AATACATATT TTTAATAATA GCAGCCTTCG ATTTTTTACA AATGATTTTC AGTTATTATT TTTTATCTGC CGATATACGA TCTGTTGTTT CGGAAAAAAC AGCACATGCA GAACCTGCGG TTCCAGTATT TTCATTGGTA CGGATAGGCT TGCTTACATT ATTTTTATAT CTGCTGTCAA CAACCTTACG GCCTTTTTAC ACAGAATTTA TTTTAGGACA AACCAGATAT GCACACACTA TTTTAGAAGC CGGATGTTTA TTCATACTAC CGAGTTTATC CGTTATTCTT TTTTATTTTA TTTTCCGAAA AGAAAATTTT TCCAGATCAG ACATGACGAT TCTGGTTGTG GCAGGTTGCT TTGCCCTGAG TGTATATGTG CAGCAATTTG AAACACCGTT TATACTTATC TGCTTCATTC GTATTGTGTA TGGATTTTTA CTGTTCTATT TATGCGTATA TCTGGATCTG TTATTTTTTG AATCTGTAAG CAGTGCACAT GTCGCAGTGT GGTACGCATT CATTCATGTC ATTCAGAATA TTGCTTACCT GACAGCACCT TTGTATGTGG GGTATAAAAT AGGCGTGAAT GGCTTGGATG CACAATTTGA TATTGCTTTC GTATGCGCTT TATTATTTCT TTCAATTCTT ACAGTTACAA GTATTTCATT TAAACGTAAA ACACATAGAT ATGAATCATT CCGATAA
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Protein sequence | MNRTILLIIA FLAIFAESLL APYYPMYFAK VFDIHDSNTV GWYIGSCRIV FMAAYPIWAV ISKRYSLGSI LICTQGMAGV ICIACAYSTS YAVFFALSLV MIFFKASYLL IYPHLIQNSS SRYKEIGVLG IILNAGMICS TLASSIWMEQ FQIQYIFLII AAFDFLQMIF SYYFLSADIR SVVSEKTAHA EPAVPVFSLV RIGLLTLFLY LLSTTLRPFY TEFILGQTRY AHTILEAGCL FILPSLSVIL FYFIFRKENF SRSDMTILVV AGCFALSVYV QQFETPFILI CFIRIVYGFL LFYLCVYLDL LFFESVSSAH VAVWYAFIHV IQNIAYLTAP LYVGYKIGVN GLDAQFDIAF VCALLFLSIL TVTSISFKRK THRYESFR
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