| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0590 |
|---|
| Symbol | iscS |
|---|
| ID | 4184441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 685912 |
|---|
| End bp | 687366 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638070595 |
|---|
| Product | putative L-2,4-diaminobutyrate decarboxylase |
|---|
| Protein accession | YP_677217 |
|---|
| Protein GI | 110637010 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.126403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACC AGGAGGCAAA TATTAACCAT TATGCCCGAA CATTACAGAA AACAATTGAT
TTTGTAACGG CACATTTCAG AAATACCACG CAGCCTTTTT CCGGGATCAC ACCCGCAGAT
CTGAAACCAG CTGTTCAGTC CATTGATTTT AATACCACCA GTTCAAGTAT TGACGATTTA
CTGCTGGAGG TAAAATCCAT TTACAGTCAG CATGCTGTTG CCTTTCATTT GCCAAAATAC
ATTGCACATC TAAATTGCCC GGTTGTAACC CCCTCACTTG CTGCTGAAAT TATTATCAGC
GCATTGAATT CGTCTATGGA TACCTGGGAT CAGAGTGCAG GGGGCACGTT GATGGAAATG
AAACTGATTG ACTGGACCTG TGAACAATTG CACTTGGGTG CTTCTGCAGA CGGTGTATTT
ACAAGCGGCG GCACACAGTC AAATTTAATG GCGCTGCTGA TGGCCCGCGA TTATTATATT
AACCGCACCT TGTTATACAA TGTAAAAATG CAGGGCTTGC CGGAAGATGC AAAACGCTTC
CGGGTATTCT GTTCGGAAAA AAGTCACTTC AGCATTAAAA AAGCATGCAG CATACTTGGC
CTCGGTGAGC ATGCAGTAGT ATGTGTTCCT GTAGGAAATC GTTTTAAAAT GAACACGAAG
GAATTAAAGA ACCTGATGGA AAAAGAAATT GCTCAGGGAA ACATTCCGAT TGCAATTGTT
GCAACAGCCG GAACTACAGA CTTTGGCAGT ATTGATCCGT TAATCGAATT AGGGGAGTTG
GCGAAAGAAT ACGGTACCTG GTTTCATGTG GATGCTGCAT ATGGCTGCGG ACTGATGCTG
AGCGATAACC ACCGGTATAA ATTAAGCGGT ATTGAATATG CGAATTCTGT AACCGTTGAT
TATCACAAAT CCTTTTTCCA GCCGGTAAGC TCCAGCGCTT TATTGGTAAG CGATAAAGAC
ACGTTAAGAC TTATGTGTTA CCATGCGGAT TACCTCAATC CGGTAGAGCA GGAAAAAGAC
GGCTATCCAA ACCAGGTAAA CAAAACCATT CAGACAACCC GCCGGTTTGA TGCACTTAAA
CTTTGGTTCA CACTGCGTTT AATGGGTAAA GACGTATTAG GTGAATACAT TGACCAGATC
ATTTACACCG CTAAACAGGC AGCGAATATG ATCGATAAAG ATCCCGATTT TGAATTGCTG
AACCATCCGG AGATCAGCAC ACTGCTGTTT CGTTATAATC CGTATTCCAC CGAAGTTTCA
GCACTGAATA CCTTAAATCA GTTTATTCGG AAAAAACTGA TGGATTCAGG AAAAGCACTG
GTTGCAAGTA CAAAAGTAAA CAACGAAGTA TACCTGAAAT TTACCCTGCT GAATCCGGCA
ACAACTGCAA AAGACATTTC AACCATTTTA GAATTAATAA AAAATATCGG CAATGAATAC
GCAAGGAATA ATTAA
|
|---|
| Protein sequence | MNHQEANINH YARTLQKTID FVTAHFRNTT QPFSGITPAD LKPAVQSIDF NTTSSSIDDL
LLEVKSIYSQ HAVAFHLPKY IAHLNCPVVT PSLAAEIIIS ALNSSMDTWD QSAGGTLMEM
KLIDWTCEQL HLGASADGVF TSGGTQSNLM ALLMARDYYI NRTLLYNVKM QGLPEDAKRF
RVFCSEKSHF SIKKACSILG LGEHAVVCVP VGNRFKMNTK ELKNLMEKEI AQGNIPIAIV
ATAGTTDFGS IDPLIELGEL AKEYGTWFHV DAAYGCGLML SDNHRYKLSG IEYANSVTVD
YHKSFFQPVS SSALLVSDKD TLRLMCYHAD YLNPVEQEKD GYPNQVNKTI QTTRRFDALK
LWFTLRLMGK DVLGEYIDQI IYTAKQAANM IDKDPDFELL NHPEISTLLF RYNPYSTEVS
ALNTLNQFIR KKLMDSGKAL VASTKVNNEV YLKFTLLNPA TTAKDISTIL ELIKNIGNEY
ARNN
|
|---|
| |