Gene CHU_0586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0586 
Symbol 
ID4184437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp679729 
End bp681108 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content40% 
IMG OID638070591 
Productmembrane protein 
Protein accessionYP_677213 
Protein GI110637006 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.561423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTC ACAAAAAACA GGTTTATCTG ATACACTCCT GGGCGGGTAT TATTGCGGGC 
ATTGGTCTAT TGATCTTATC TGTTACCGGT ACTGTGCTTT GTTTTAAATC AGATCTGGAA
CCAATCGTTT ATCCTGAATT AGTTGCATTT AAAAACGCGC AGCCGGTAAA ATCCTATGAT
GCTCTTTATA AAGAAGCTGC TGAAGCTTAT CCGGACTATT TTATGTTACG CATCTATGCA
CCATCAGAGC GTGATGAAAC ATACAAGGCG ATTATGTTTG GTAAAAAAAA TATAGAAGAC
GATATTCATA TTTATTATAC CCAAACCGGC TGGAAACAGC TGCCCGACCG CTGGCTGCAT
GTAGTAGAAG AGCTGCATGT TTATTTATTA ATGACCCGCT ACACCGGGAT GGTCTTTAAC
TTTCTCTTAA GCGCTGCGTT GGTATGTGTG AGCATTACCG GATTCTGGAT CTACCGCAAA
CCGATTTTTA ATATCCTTTC GTTTAAGACT CCTCTTCAGT TAAAATCGCT TGCAAACTGG
CATAACAATA TTGGATTGAT ATCGCTCGTA TTCTGCTCCA TAATGGGATC TACAGCGCTG
ATCATCACGT TCCCTTCTGC TTTCAGCGGA CCTGTTAAAG CACGTGTATT ACAAACAGAA
ATGATCAGCG GTAACCTGGA CGATCTGATT ATTAAATCTA TTCCGTTCAA GGGAGACAGC
ACAGAAAAAT TAAATAACAT TACTTTTCTG CATGACAAAC TTCAGTTTCA TTATAATAAT
CCTTTTTATA AAAACGGTGC GCTGGGCGAA TTTACCCGTG TAGTGCTGGA TACAAAAACG
GGAGAAAAAG TAAAACGCTC CGGCAAATCT GAAACTGAGC TGATGCGTGC ATTAAATAGT
TGTGTATCCT TTCACTATGG AAATTTCGGC GGGCTTACAA TAAAGATCCT GTATTCATTG
AGCGGCATTT TGCTATCGCT GATTGTTGTT ACGGGAGGAT TACTTTATTT TAAACGAACA
AAAAAAATAA GCTGGAACAA AAAGACCGTG AAAGCCAATG CTGTTGCGGT TACAGCAGCC
CAGCGTTTTA AACAAACAGT AACATACTGG TCCGTATTTT TTACAGGTTT CTTCTTTATC
GGAGCATTGC TAGGCTTGTT CATGGGTCAG CCTTTCCGAT CCGGCGTATA TCTTACAGTA
CTATTATTAT TCCCTTTTGT ATTGAATATG CTTTTGCTCG CTGTGTTTCT CCTTTTCTAT
CATTTGACCC GTTTGATCCG AAGAAGAAAA ACAACACAAT TCATCTCCAG CTACAGCAGT
ATTTCACTAT ACTTCTTCAC GCCTACGTTG GCTTGGTATG TGCTGGTATA TGTGTGGTAA
 
Protein sequence
MAIHKKQVYL IHSWAGIIAG IGLLILSVTG TVLCFKSDLE PIVYPELVAF KNAQPVKSYD 
ALYKEAAEAY PDYFMLRIYA PSERDETYKA IMFGKKNIED DIHIYYTQTG WKQLPDRWLH
VVEELHVYLL MTRYTGMVFN FLLSAALVCV SITGFWIYRK PIFNILSFKT PLQLKSLANW
HNNIGLISLV FCSIMGSTAL IITFPSAFSG PVKARVLQTE MISGNLDDLI IKSIPFKGDS
TEKLNNITFL HDKLQFHYNN PFYKNGALGE FTRVVLDTKT GEKVKRSGKS ETELMRALNS
CVSFHYGNFG GLTIKILYSL SGILLSLIVV TGGLLYFKRT KKISWNKKTV KANAVAVTAA
QRFKQTVTYW SVFFTGFFFI GALLGLFMGQ PFRSGVYLTV LLLFPFVLNM LLLAVFLLFY
HLTRLIRRRK TTQFISSYSS ISLYFFTPTL AWYVLVYVW