Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0586 |
Symbol | |
ID | 4184437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 679729 |
End bp | 681108 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070591 |
Product | membrane protein |
Protein accession | YP_677213 |
Protein GI | 110637006 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.561423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATTC ACAAAAAACA GGTTTATCTG ATACACTCCT GGGCGGGTAT TATTGCGGGC ATTGGTCTAT TGATCTTATC TGTTACCGGT ACTGTGCTTT GTTTTAAATC AGATCTGGAA CCAATCGTTT ATCCTGAATT AGTTGCATTT AAAAACGCGC AGCCGGTAAA ATCCTATGAT GCTCTTTATA AAGAAGCTGC TGAAGCTTAT CCGGACTATT TTATGTTACG CATCTATGCA CCATCAGAGC GTGATGAAAC ATACAAGGCG ATTATGTTTG GTAAAAAAAA TATAGAAGAC GATATTCATA TTTATTATAC CCAAACCGGC TGGAAACAGC TGCCCGACCG CTGGCTGCAT GTAGTAGAAG AGCTGCATGT TTATTTATTA ATGACCCGCT ACACCGGGAT GGTCTTTAAC TTTCTCTTAA GCGCTGCGTT GGTATGTGTG AGCATTACCG GATTCTGGAT CTACCGCAAA CCGATTTTTA ATATCCTTTC GTTTAAGACT CCTCTTCAGT TAAAATCGCT TGCAAACTGG CATAACAATA TTGGATTGAT ATCGCTCGTA TTCTGCTCCA TAATGGGATC TACAGCGCTG ATCATCACGT TCCCTTCTGC TTTCAGCGGA CCTGTTAAAG CACGTGTATT ACAAACAGAA ATGATCAGCG GTAACCTGGA CGATCTGATT ATTAAATCTA TTCCGTTCAA GGGAGACAGC ACAGAAAAAT TAAATAACAT TACTTTTCTG CATGACAAAC TTCAGTTTCA TTATAATAAT CCTTTTTATA AAAACGGTGC GCTGGGCGAA TTTACCCGTG TAGTGCTGGA TACAAAAACG GGAGAAAAAG TAAAACGCTC CGGCAAATCT GAAACTGAGC TGATGCGTGC ATTAAATAGT TGTGTATCCT TTCACTATGG AAATTTCGGC GGGCTTACAA TAAAGATCCT GTATTCATTG AGCGGCATTT TGCTATCGCT GATTGTTGTT ACGGGAGGAT TACTTTATTT TAAACGAACA AAAAAAATAA GCTGGAACAA AAAGACCGTG AAAGCCAATG CTGTTGCGGT TACAGCAGCC CAGCGTTTTA AACAAACAGT AACATACTGG TCCGTATTTT TTACAGGTTT CTTCTTTATC GGAGCATTGC TAGGCTTGTT CATGGGTCAG CCTTTCCGAT CCGGCGTATA TCTTACAGTA CTATTATTAT TCCCTTTTGT ATTGAATATG CTTTTGCTCG CTGTGTTTCT CCTTTTCTAT CATTTGACCC GTTTGATCCG AAGAAGAAAA ACAACACAAT TCATCTCCAG CTACAGCAGT ATTTCACTAT ACTTCTTCAC GCCTACGTTG GCTTGGTATG TGCTGGTATA TGTGTGGTAA
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Protein sequence | MAIHKKQVYL IHSWAGIIAG IGLLILSVTG TVLCFKSDLE PIVYPELVAF KNAQPVKSYD ALYKEAAEAY PDYFMLRIYA PSERDETYKA IMFGKKNIED DIHIYYTQTG WKQLPDRWLH VVEELHVYLL MTRYTGMVFN FLLSAALVCV SITGFWIYRK PIFNILSFKT PLQLKSLANW HNNIGLISLV FCSIMGSTAL IITFPSAFSG PVKARVLQTE MISGNLDDLI IKSIPFKGDS TEKLNNITFL HDKLQFHYNN PFYKNGALGE FTRVVLDTKT GEKVKRSGKS ETELMRALNS CVSFHYGNFG GLTIKILYSL SGILLSLIVV TGGLLYFKRT KKISWNKKTV KANAVAVTAA QRFKQTVTYW SVFFTGFFFI GALLGLFMGQ PFRSGVYLTV LLLFPFVLNM LLLAVFLLFY HLTRLIRRRK TTQFISSYSS ISLYFFTPTL AWYVLVYVW
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