| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0570 |
|---|
| Symbol | |
|---|
| ID | 4184056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 663852 |
|---|
| End bp | 664433 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638070575 |
|---|
| Product | esterase |
|---|
| Protein accession | YP_677197 |
|---|
| Protein GI | 110636990 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0451688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTATAATT TGTTTTTTTT GATTGTTTAC ATGCTGGATA ACCGTTTTAA TTATATAAAT
GTGCCCGGTC TGGGTGGCTC AGGAGAACAT CACTGGCAAA CGTTCTGGGA GCAGGCATAT
CCGGAGATTC ATCGGGTACA GCAAGCCGAT TGGGATCACC CGATTTGTTC GGTTTGGGTG
AATAAGCTGC AGCTGATAAC AGAAACCTGC AGCGATAAAC CTGTTGTACT GATTGCACAC
AGCCTTGGCT GCGTAACAGT TTTGCATGCT GTTGCGCAGC GTAAACTGAA AGGTATTGCG
GGCGCGTTTC TGGTTGCCAT GCCCGATGCA GAACGCGCTG ATTTTCCGAA AGAATGTATC
GGATTTATAC CGGTGCCGAG GATTGTATTG CCCTTTCCGG CTGTAATGAT TGCAAGTGAA
AACGATCCAT ATATTACGAG TCCTGAATTA AAAAAATGGG CAGATGTTAT ACAGGCATCG
TTTGTTTCTG TTGGCCAGCG CGGGCATATC GGTACTGCAG CACAATTGAC GTATTGGGAA
GAAGGACAAC AATTGTTTCG TTCATTTGTT GAACAATTGT AA
|
|---|
| Protein sequence | MYNLFFLIVY MLDNRFNYIN VPGLGGSGEH HWQTFWEQAY PEIHRVQQAD WDHPICSVWV
NKLQLITETC SDKPVVLIAH SLGCVTVLHA VAQRKLKGIA GAFLVAMPDA ERADFPKECI
GFIPVPRIVL PFPAVMIASE NDPYITSPEL KKWADVIQAS FVSVGQRGHI GTAAQLTYWE
EGQQLFRSFV EQL
|
|---|
| |