| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0566 |
|---|
| Symbol | |
|---|
| ID | 4184052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 659674 |
|---|
| End bp | 660111 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638070571 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677193 |
|---|
| Protein GI | 110636986 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2259] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00681752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.504746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGAC GAGTCATTCA TACGGATAAC GATAAGCAAA CGATCATCAT CCGTTTCCTT
GTTGGCTGTG TATTTTTATC TGAAGGCATT CAAAAAATCT TATTTGCCAA AACACTTGGC
AGCGGGCGTT TTGAAACAAT CGGCTTGCCT GCGCCGGAAA TTTTAGGACC GTTTGTAGCT
ATGGTTGAAA TCTGCGGTGG ATTTTTACTG CTCATTGGAT TGTTTACCCG ACTGGTATGT
GTTCCATTGA TTGTAGTCAT CCTGGCAGCA ATTGCAACAA CTAAGTCGGT TATTTATGTT
GAAAAAGGTT TTTGGGAATT GCTTCATAAC AGCAGAACAG ACTGGGCTAT GCTGTTAGGC
TGCATGTTCC TTTTCATAAA AGGGAGTGGT TTTTATTCGG TAGATTATAC CTATAATAAA
ATAAAAAGCT ACGCTTGA
|
|---|
| Protein sequence | MLRRVIHTDN DKQTIIIRFL VGCVFLSEGI QKILFAKTLG SGRFETIGLP APEILGPFVA
MVEICGGFLL LIGLFTRLVC VPLIVVILAA IATTKSVIYV EKGFWELLHN SRTDWAMLLG
CMFLFIKGSG FYSVDYTYNK IKSYA
|
|---|
| |