Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0562 |
Symbol | pys |
ID | 4184048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 655761 |
End bp | 657191 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638070567 |
Product | phytoene dehydrogenase |
Protein accession | YP_677189 |
Protein GI | 110636982 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.57864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATA TATATGATGC AGTAGTTGTC GGATCCGGCC CCAACGGTCT GGCAGCAGCC ATTACACTCC AACGGAAAGG ATTTGCTGTG TTGGTGCTGG AAGCAAAAGA TACCATCGGC GGTGGTTTAC GTACGAAAGA GCTCACGTTA CCTGGGTTTA AGCACGACGT GTGTTCTGCT ATACATCCGA TGGCAGTTGC TTCTCCGTTC TTTGCGGATA TACCGCTGGA TAAATTCGGG TTGCGGTTTA CACATGCGCC TATTGCTGCG GCACATCCCT TTGATCATGG CGGAGCAGCC ATTCTTTCGC GTTCGCTAAA AGATACAATC GCGTTGCTGG GTAAAGATGC AGATAATTAC AAACGGTTAA TAGAGCCTGT TATAGAAAGC TGGCCCGATA TTGCTGCAGA CGCTATGGGG CCGTTACGGT TTCCCAAACA TCCGTTGAAG ATGGCCGCGT TTGGATTAAA TGCGATCCGC TCTGCAGATT GTATATCCAA ACGCTTCGAA ACCGAAGAAG CAAAAGGGTT GTGGGCAGGC ATGGCAGCAC ATTCCATACA ACCGTTGACC AATTGGGCTT CGGCTGCAAT CGGTTTGGTA CTTTCTGCGG TTGGCCATTT GCATGGCTGG CCAATACCTA TCGGCGGTTC ACAGGCTATT GCAGATGCAT TGGGTTCGTA TTTTATTTCA CTTGGTGGTA CCATTCAGAC AAATGTTGAA GTGACTTCTC TCAATCAGCT GCCGGCAGCC AGGGCTGTAC TGTTTGATGT TACTCCCAAA CAACTATTGA AAATTACCGG CGATGAATTC TCCGGTTTGT ATAAAAAACA ACTAACGAAT TACCGTTACG GTATGGGCGT GTTTAAAGTA GACTGGGCAC TCAGCGAACC TGTTCCGTTT ACATCCGATC ATTGCAGGCA GGCAGGTACC GTGCATCTTG GCAATACATT CAACGAAATT GCCTTGAGTG AACAGGAGAC ATCTTCCGGT AAACATCCGG AAAAACCATT TGTGTTATTT GCGCAGCAAA GCAAATTTGA TATAACGCGT GCCCCCCAGG GTAAGCATAC TGCCTGGGCA TATTGCCACG TACCTAATGG TTCCGCAACA GATATGACAG CTGCGATTGA AAATCAGCTT GAACGTTTTG CACCGGGATT TAAAGATACT ATTCTGGCAA AAAATACCAT GAACACCGTA GAGATACAGG CATACAATCC CAATTATATT GGCGGTGATA TCAATGGCGG TATCATTGAC ATTCGTCAGT TGTATACACG GCCCGCAGTG AAAATTTCAC CTTACAGAAC ACCTAAGAAA GGTATTTATA TATGTTCATC TTCTACACCT CCCGGTGGCG GTGTACACGG TATGTGCGGC TTTCATGCTG CGCAGGCTGT TATACAGGAT CTTAAAAAAC AATACAAGTA G
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Protein sequence | MSNIYDAVVV GSGPNGLAAA ITLQRKGFAV LVLEAKDTIG GGLRTKELTL PGFKHDVCSA IHPMAVASPF FADIPLDKFG LRFTHAPIAA AHPFDHGGAA ILSRSLKDTI ALLGKDADNY KRLIEPVIES WPDIAADAMG PLRFPKHPLK MAAFGLNAIR SADCISKRFE TEEAKGLWAG MAAHSIQPLT NWASAAIGLV LSAVGHLHGW PIPIGGSQAI ADALGSYFIS LGGTIQTNVE VTSLNQLPAA RAVLFDVTPK QLLKITGDEF SGLYKKQLTN YRYGMGVFKV DWALSEPVPF TSDHCRQAGT VHLGNTFNEI ALSEQETSSG KHPEKPFVLF AQQSKFDITR APQGKHTAWA YCHVPNGSAT DMTAAIENQL ERFAPGFKDT ILAKNTMNTV EIQAYNPNYI GGDINGGIID IRQLYTRPAV KISPYRTPKK GIYICSSSTP PGGGVHGMCG FHAAQAVIQD LKKQYK
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