| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0560 |
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| Symbol | soxD |
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| ID | 4184046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 653851 |
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| End bp | 654480 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070565 |
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| Product | sulfite oxidase cytochrome subunit |
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| Protein accession | YP_677187 |
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| Protein GI | 110636980 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3258] Cytochrome c |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.876942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAT TGACCTGGCC GTTCTGTATA TGCTTCACAA TGTTTTTAAC AGCAGGTTCA
ATTACAGCAT GTAATAAAAA AATACATACC TGGGTTGCTG CTGAAGATAC GCTTAACAAA
ACTACTGGAA TTGAAAAAAC AGCAGCTGTA TTTCCGGATA CCTTTGGTTT CGGCCAGTCT
GTATCAACTG AATATATTCG AAAATTTGAT ATCGATGTAC GTCCGGATGG AAGAGGGTTA
CCTGCCGGTG CAGGTATGGT GAAAGAAGGC CGGAGCATCT ATCTGGAAAA ATGTACCGTG
TGTCATGGGA AGACAGGCAG AGAAGGAGGG CCTGGCGGAA AACTTGTTTC ATCACCGCCT
GATTCAAACA AAACAAAAAC AATCGGTAAC TATTGGCCAT ATGCAACAAC TGTGTACGAT
TATATAAACC GTGCAATGCC GTACAATGCG CCCGGTTCAC TCACCAGCAA GGAAGTATAT
GACCTTACTG CTTATTTGCT GTATGAGAAT GGTATCATTG ATTCTGTATT TGTTGTCACA
GAAAAAACAT TACCACTGAT TGAAATGCCG GCGAAAAAAT TATTTGTTCC GGATAACAGG
TTAGATGAAA TAAAATCCGG CAGCAGATGA
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| Protein sequence | MKQLTWPFCI CFTMFLTAGS ITACNKKIHT WVAAEDTLNK TTGIEKTAAV FPDTFGFGQS
VSTEYIRKFD IDVRPDGRGL PAGAGMVKEG RSIYLEKCTV CHGKTGREGG PGGKLVSSPP
DSNKTKTIGN YWPYATTVYD YINRAMPYNA PGSLTSKEVY DLTAYLLYEN GIIDSVFVVT
EKTLPLIEMP AKKLFVPDNR LDEIKSGSR
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