| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0539 |
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| Symbol | cusC |
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| ID | 4186170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 625633 |
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| End bp | 627123 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638070544 |
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| Product | outer membrane lipoprotein |
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| Protein accession | YP_677166 |
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| Protein GI | 110636959 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00107001 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT TAAACCTATT CATATATCTT GTTTTAGCAG GCTTGCTGTA CACAAACTGT
GTCAGTACAA AACAAACCCC ACAGGCAGCA ATGGCACCGC TTCCTTCAAC ATTTGCCGTT
ATCCCGGATT CGCTGAAGAT GGCATCGGCA GGAGATTCAA CAGCTGCAAA ACAGAAAGAG
GACTCGTCTA CGGTAGCAGC TATAAACTGG AGAGAATACT TTAAAGATTC CACCCTGATA
GGATTAATCG ATACGGCACT GAAGAATAAC CTGGATATTC AGGTGGCGTA TCAGCGCATC
CTGGTTGCGC GTGCCAACGT GAAGCGTACA AAAGGTGCTT CTGCTCCCTT TATATCCGGG
GCTGTTTCGG CCGGACAACA GAACTATGGG GATTATACGC AGGAAGGTGT CGGTAATTAC
GATACCAACT TTTCACCGAA TGTTACCGAT GAGCAGCACA TGTCGCCGGA TTTAAGAGAC
CTGTATCTAC GGTTGGAAAC ATCCTGGGAA GTGGATGCAT GGGGTAAACT CAAAAACAAG
CGCCGGGCAG CGAAAGCCAA ATACCTCGCT TCGGTAGAAG GCAAGAACTG GGTGGTTACC
AATATGATCG CAGAAATCGC AACAACGTTT TACGAATTGC TTGCGCTGGA TTATGAACTA
TCCATCATTA ACGAAACCAT TATTTTACAG ACAAATCAGT TATCAATTGT TGAAACACAG
AAAGAAGCAG GCAGAGCCAA TGAATTAGCT GTTAAGCAAT TTGAGGCTCA GGTACTGCAT
TCAAAAGGGT TACAGATTGA AATCAGTCAG CGGATCGTTG AAGCGGAAAA CAGGATCAAT
TATTTATTGG GAAGATTTCC GCAGCCGATA GAGCGGGATG TAAACCATTT CATCCTTACA
TCTCCGCAGC AGATAAGCGT TGGTATTCCT TCAAATTTAT TAAGCAACAG GCCGGACATT
AAACAGGCAG AGTATGAACT GAAAGCTTCA AAGGCAAATG TTAAAGCCGC TAAAGCTGCC
TTCTATCCAT CGTTGACAAT TACCGGTGCA TTAGGCTTCC GTTCGTTTAA CCCAAATTAT
TTTATAACAC CGCAGGCACT TGTAAATAAT ATTTTTGGCG GATTAGTTGC CCCCTTAGTA
AATCAAAGTG CGATCAAGGC TTCATTCAGA ACTGCAAAGG CGGAACAGGT AGAAGCAATG
TACAACTACC AGAAAGCAAT TCTGAACGGA TATATCGAAG TGTATAATCA GATGGTATAC
ATCAATAACC TGAACCGGAT TTATGATTTA AAGGATCAGG AAGTTGCTGT ATTGACAACA
TCCATAGAAA CAGCTTCGGA ATTGTTCCTT ACCGGCCGTG CTACATATCT GGAAATTATT
ATTACACGTT CAGCAGCCTT GCAATCACGA CTGGAGCTGA TCAATATTAA GAAGAGACAG
TTTAATTCTG TCGTGAATAT ATATAAAGCA TTGGGTGGCG GCTGGAAATA A
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| Protein sequence | MKRLNLFIYL VLAGLLYTNC VSTKQTPQAA MAPLPSTFAV IPDSLKMASA GDSTAAKQKE
DSSTVAAINW REYFKDSTLI GLIDTALKNN LDIQVAYQRI LVARANVKRT KGASAPFISG
AVSAGQQNYG DYTQEGVGNY DTNFSPNVTD EQHMSPDLRD LYLRLETSWE VDAWGKLKNK
RRAAKAKYLA SVEGKNWVVT NMIAEIATTF YELLALDYEL SIINETIILQ TNQLSIVETQ
KEAGRANELA VKQFEAQVLH SKGLQIEISQ RIVEAENRIN YLLGRFPQPI ERDVNHFILT
SPQQISVGIP SNLLSNRPDI KQAEYELKAS KANVKAAKAA FYPSLTITGA LGFRSFNPNY
FITPQALVNN IFGGLVAPLV NQSAIKASFR TAKAEQVEAM YNYQKAILNG YIEVYNQMVY
INNLNRIYDL KDQEVAVLTT SIETASELFL TGRATYLEII ITRSAALQSR LELINIKKRQ
FNSVVNIYKA LGGGWK
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