| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0538 |
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| Symbol | acrB |
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| ID | 4186169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 622480 |
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| End bp | 625626 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638070543 |
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| Product | AcrB/AcrD family multidrug resistance protein |
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| Protein accession | YP_677165 |
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| Protein GI | 110636958 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.199673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.872862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGTA TATTTATTAA CAGACCCGTT TTATCGATTG TAATATCGCT CATTATCGTT
TTTTTAGGCG TGTTGTCGCT GGTACAATTG CCCGTTACCC AATATCCGGA TATTGCACCG
CCGGTAGTAG CTGTAACCAC AAAGTATACA GGCGCAAGTG CTGAAGTATG CGCCAAAGCT
GTTGTAACAC CGCTGGAACG TGCCATCAAC GGGGTGGCCG GCATGTCGTA TATGACATCC
GTTTCCGGTA ACGACGGTAC CAGTATTATA CAGGTTTATT TTCAGGCCGG TGTTGATCCC
GATCTGGCTT CGGTGAACGT GCAGAACCGT GTGACTGCCG TGCTCGAAGA AATGCCGGAA
GAGGTTATCA AATCCGGTAT CATCATTGAA AAGGAAGTCA ACAGTATGCT GATGTACTTA
AATATTTTAA GCTCAGATTC TACCATCGAT GAAAAATTCC TCTATAATTT TGCCGATATA
AATATTCTTG CGGAATTAAA ACGGATCAAT GGTGTGGGCT TTGCAGACAT CATGGGGCAG
CGGGAATATT CCATGCGTAT CTGGCTGCGT CCGGATCGTA TGACCGTGTA TGATGTTTCA
GCTGCTGATG TAATCCATTC ACTGCGTGAA CAGAACGTTG AAGCAGCACC GGGTAAAATA
GGCGAAAGCT CCGGCCGCAA ATCCCAATCA CTGCAGTATG TAATACGGTA TACCGGTAAG
TTTACAAAAA AAGAACAGTA TGAAAATATT GCGATCAAAG CCAGTGCCAA CGGGCAGATT
CTGCGTCTGA AAGATATTGC CGAGATTGAA TTCGGCTCGC TGGATTACGA CGTATTATCA
AAAGAAAACG GCCGGCCTTC TGCCGCTATT ATATTGAAAC AGCGGCCGGG TTCCAATGCC
AGTGAAGTGA TTGAAAACAT AAAATCCAAG ATGGCAGAAC TGAAAGCCAC AAGCTTTCCG
CCGGGCATGG AATATACCAT CAGTTACGAT GTATCGCGCT TTCTGGATGC TTCTATTCAT
GAGGTAATCA AGACGCTGAT CGAAGCCTTT ATTTTAGTTG CCATTGTAGT ATTTATTTTC
TTACAGGATT TTCGCTCTAC CATTATTCCG ATTATTGCCG TACCTGTTTC GCTGATCGGT
ACGTTCTTCT TTATGGATAT GCTTGGTTTC TCCATCAACC TGCTTACCTT ATTTGCCCTG
GTATTGGCAA TTGGTATTGT GGTAGATGAC GCCATTGTGG TAGTTGAAGC TGTGCACGTA
AAAATGGAAA AGTTTCATAT GAATGCGCGT GAAGCTACAC ATGCATCTAT GAAAGAGATC
AGCGGTGCCA TTATCGCAAT CACCCTGGTT ATGTCCGCCG TGTTTATCCC CGTAGCTTTT
ATGACTGGTC CCGTGGGTGT ATTCTATCGC CAGTTCTCCA TAACTATGGC CATTGCTATT
GTAATCTCCG GGGTGAACGC GTTAACATTA ACGCCGGCCT TGAGTGCCTT GTTATTAAAG
TCTCACCACG GACAGAAAAA GAAAAACAAT ATTCTAACCA AGTCCTTTTA CATTTTCAAC
AAAGGTTTTT ATAACGTAAC CTTCAAATAC CAGCATTTAC TTACACTGGT GGTAAACAGA
AAGATTGTGA CTTTCGGTCT GCTGTTATTT TTCCTTATTG GTATTAAAGG ATTAAGTGTT
GTATTGCCAA CCGGCTTTAT TCCTACGGAA GATCAGGGTA CCATCTATGC AAGTGTAACG
ACACCATCCG GCGCTACGCT GGAGCGTACC GAATCGGTAG TGGATGCCAT TGACCGCATT
ACCAGAGGCC TTGATGGAGT AGAATCTGTT TCGACTATGG CAGGATTTAA CGTGATGACA
GATGGTTCGG GTGCTACCTT CGGTATGGCC ATGGTAAACC TGAAACCCTG GGAAGAACGT
AAATCATCGG TTGATGAAAT CATCGATTCG TTAACCATAA AAACAAAATA CCTGAAGGAT
GCGTCGATCC AATTCTTTCC GCCGCCCGCT GTACCGGGTT ATGGGAATGC CAGCGGTTTT
GAATTCCGGA TCCAGGACCG TTCCGGTACG GGGGATCTGC AGAAGTTGCA GCAGGTAACA
GATAAATTTA TTACAGAACT GAATAAGTGT AAACAGATTG ATGAAGCGTT TACCAGTTTT
GATGCAAGCT TCCCGCAATA CCTGGTTAAA ATTGATTATG ATAAAGCGGC GCAGAAAGAT
GTAACGGTAA ACAATGCCAT GGATAACCTT CAATCGCTGA TCGGAAGTTA TTACGCAACA
AACTTTATCC GTTTCGGACA GATGTATAAA GTAATGGTGC AGGCGCTTCC GAAGTACAGA
GCGCAGCCGC AGGATATTTT GAAACTGTAT GTGAAAAATA ATAAAGGAGA AATGGTTCCG
TATTCTGCAT TCATTACCGT TGAACGTATT TATGGTCCGG AACAGTTAAC GCGTCATAAT
ATGTTTACTG CAGCTATGAT AAACGGCGAG CCTGCTCCCG GCTACAGCAG CGGTGAAGCC
ATTGTTGCGA TTAATGAAAC AGCAGAAAAA TTCCTGCCCA AAGGATATAC CTTTGAATGG
TCGGGCATGA CGCGCGATGA GATTCTTTCC GGCAATCAGG TAACCGTTAT CTTTATCGTC
TGCCTGATTT TTGTGTATCT GATTCTTGCC GCACAATACG AAAGTTTTAT TCTTCCCTTT
GCCGTTATTC TGTCTTTGCC AACAGGTATT TTCGGCGCCT ATTTATTGTT GTACCTGTTA
GGCCTGCAGA ATAATATTTA TGCCCAGGTA GCACTGGTAA TGCTTATTGG TTTGCTGGGT
AAAAATGCCA TTCTGATTAT TGAGTTTGCC TTATTAAAAC AGAAGGAAGG AAAAACACCC
TACGAAGCCG CGATTGAAGG TGCAGCTGCC CGTTTCAGGC CAATCTTAAT GACATCGTTT
GCATTTGTTG CCGGTTTGAT CCCGCTGATG ATTGCAAGCG GCGCAGGGGC AATCGGTAAC
CGTACCATCG GTACAGCCGG TGCCGGCGGG ATGTTCATTG GCACCATCCT GGGCCTGGTT
ATTATTCCGG GACTTTATGT AGTTTTTGCA ACACTGGATC AGCGTTTTTC TACCAAAAAA
GATCAGCAAC TTAATTTAAA TGTTTAA
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| Protein sequence | MFSIFINRPV LSIVISLIIV FLGVLSLVQL PVTQYPDIAP PVVAVTTKYT GASAEVCAKA
VVTPLERAIN GVAGMSYMTS VSGNDGTSII QVYFQAGVDP DLASVNVQNR VTAVLEEMPE
EVIKSGIIIE KEVNSMLMYL NILSSDSTID EKFLYNFADI NILAELKRIN GVGFADIMGQ
REYSMRIWLR PDRMTVYDVS AADVIHSLRE QNVEAAPGKI GESSGRKSQS LQYVIRYTGK
FTKKEQYENI AIKASANGQI LRLKDIAEIE FGSLDYDVLS KENGRPSAAI ILKQRPGSNA
SEVIENIKSK MAELKATSFP PGMEYTISYD VSRFLDASIH EVIKTLIEAF ILVAIVVFIF
LQDFRSTIIP IIAVPVSLIG TFFFMDMLGF SINLLTLFAL VLAIGIVVDD AIVVVEAVHV
KMEKFHMNAR EATHASMKEI SGAIIAITLV MSAVFIPVAF MTGPVGVFYR QFSITMAIAI
VISGVNALTL TPALSALLLK SHHGQKKKNN ILTKSFYIFN KGFYNVTFKY QHLLTLVVNR
KIVTFGLLLF FLIGIKGLSV VLPTGFIPTE DQGTIYASVT TPSGATLERT ESVVDAIDRI
TRGLDGVESV STMAGFNVMT DGSGATFGMA MVNLKPWEER KSSVDEIIDS LTIKTKYLKD
ASIQFFPPPA VPGYGNASGF EFRIQDRSGT GDLQKLQQVT DKFITELNKC KQIDEAFTSF
DASFPQYLVK IDYDKAAQKD VTVNNAMDNL QSLIGSYYAT NFIRFGQMYK VMVQALPKYR
AQPQDILKLY VKNNKGEMVP YSAFITVERI YGPEQLTRHN MFTAAMINGE PAPGYSSGEA
IVAINETAEK FLPKGYTFEW SGMTRDEILS GNQVTVIFIV CLIFVYLILA AQYESFILPF
AVILSLPTGI FGAYLLLYLL GLQNNIYAQV ALVMLIGLLG KNAILIIEFA LLKQKEGKTP
YEAAIEGAAA RFRPILMTSF AFVAGLIPLM IASGAGAIGN RTIGTAGAGG MFIGTILGLV
IIPGLYVVFA TLDQRFSTKK DQQLNLNV
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