| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0537 |
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| Symbol | |
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| ID | 4186168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 621282 |
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| End bp | 622427 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070542 |
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| Product | HlyD family multidrug resistance protein |
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| Protein accession | YP_677164 |
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| Protein GI | 110636957 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.996753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.690705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTAAGT GCTTAACTAT TTATTATAAA ATGACAAAGC TATTTGTTTA TACAGGTCTG
ATTATTCAAT TGGTTTCCCT GAGTTGTTCA TTCGATAAAG AAAAAAAACA AAGCGAAAAA
TTCACCGTAA CCCGTCCGAT TATTATTGAT ACAGTGTATT ACATTGATTA TGTTTCAGAT
ATCCACTCTG TTAAAAACGT TGAGATCAGA TCGCGTGTAA AAGGATATGT TGAAAGCATT
CTGGTAGATG AGGGCATGTC TGTGAAAAAA GGCCAGATCC TTTTCCGTAT CAGTGACCAG
GAATACAAAG AAGATTTATT AAAGGCAAAG GCGAATCTGA AAAATGCGAT CGCTGAAGCA
AAGTCTGCGG AACTGAACCT GCAGAATGTA AAAGTGCTGG TAGATAAAAA TGTTGTATCC
AGAACAGAAC TGGATATGGC AACAGCAAAG CTGGATGCCC TGAATGCCAA TATTGATGAG
GCAAAATCGC ATGAAGTGAG TGCTCAGCTT AAATTAGGTT TTACAGAAGT ACGTGCTCCG
TTTGACGGCA TCATTGACCG TATTCCAAAC AAAGCAGGCA GCTTAATTGA CGAAGGTACG
TTGCTGACAA CCTTATCTGA TAACAGCGAA GTATTTGCTT ATTTTAATGT GTCAGAAAAA
GAATACTTAG ATTTTACATC AGACCGTTCC GGCTCATACA GCAAGTCTGT AAGCCTTATT
TTAGCGAACA ATGAAGAACA TCCCTATAAA GGCCAGGTAG AAACAATAGA AGGCGAGTTT
GATAATTCAA CCGGAAGTAT TGCCTTCCGC GCACGTTTCC CGAATCCGGA TAAAGTATTG
AAACACGGCT CAAGCGGTAA GATCCGTTTG AAAAGATCGG TGCAGAATGC GCTGGTGATT
CCGCAGAAAT CGACCTTTGA AATTCAGGAC CGCATGTTTG TTTATGTAGT AAATCACGAC
AACGTTGTTG AGATGCGCGG CATACAGCCT AAATTGCGCA TCCCGCATTT ATATATTTTA
GAATCGGGTA TTACCGCGAA TGATAAATTT ATATACGAAG GCATTCAGGA TGTAAGAGAA
GGAGAAGAAA TTGCGCCGGA GTTTGTTTCG CTCAAAGCAA TTATCGCTCA GTTTGAAGCA
CACTAA
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| Protein sequence | MFKCLTIYYK MTKLFVYTGL IIQLVSLSCS FDKEKKQSEK FTVTRPIIID TVYYIDYVSD
IHSVKNVEIR SRVKGYVESI LVDEGMSVKK GQILFRISDQ EYKEDLLKAK ANLKNAIAEA
KSAELNLQNV KVLVDKNVVS RTELDMATAK LDALNANIDE AKSHEVSAQL KLGFTEVRAP
FDGIIDRIPN KAGSLIDEGT LLTTLSDNSE VFAYFNVSEK EYLDFTSDRS GSYSKSVSLI
LANNEEHPYK GQVETIEGEF DNSTGSIAFR ARFPNPDKVL KHGSSGKIRL KRSVQNALVI
PQKSTFEIQD RMFVYVVNHD NVVEMRGIQP KLRIPHLYIL ESGITANDKF IYEGIQDVRE
GEEIAPEFVS LKAIIAQFEA H
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