| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0530 |
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| Symbol | |
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| ID | 4185160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 609789 |
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| End bp | 613421 |
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| Gene Length | 3633 bp |
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| Protein Length | 1210 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638070535 |
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| Product | hypothetical protein |
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| Protein accession | YP_677157 |
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| Protein GI | 110636950 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0010082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0887655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAT ATAACGAAAT TCTGAAACAG CTAGTGAAAA ATCACCTGAT GCTGCTTGCC
GCTTGTGTAC TGTTATTACT GAATGCTGCT GAAACAAAAG CCCAGACTCC GCACATCGAT
AAAATTGCGC CGTTAAGCGG CGACATAAGT AAAACAATTG TAACCATCTC CGGTAACAAC
CTGGTTTACA AAAATCTGGT ACCAAAAGTA TTTTTCGGCA CCATTCCCGC AAATATCTAC
AGCCAATCGG AGACGGAAAT AAAAGTTACT GTTCCGTTAG GGGCTTCATA TGACCACATC
ACGGTTGTTG TTTCGCCGAC AGGTACTGCC ATCAGCGAAC AGTTTTTTCA GGTGCTGCAA
GCTTCACCCT GTGATTTTAC AACACCGCAG TTTAATGTAG CAGAAATAAT TGCCACCAAT
ACATTTACTC CTGTATATCA CGCGCTCGCG GATGTAAACG GCGACCGCAA ACCGGACTTA
CTGGTCTTAA GCGATAACTC CCGAATCTCC ATTTATAAAA ACAGCTCAAC ACCAACAAAT
GTTAATTTTG AAAAATTCTT TGAAACAACG CTGCTCACAA CTGCCGTACC GGCTTCTCTT
GCTGTAGCAG ACCTCAACAC CGATGGGGTT ATGGATATTG TTGTTGGTTA TAGTGCAGGT
AACCGCATCA CCATTTTACC GGGTACTACC GGTACTTCGT TTGGTACGGC GGCACACATT
ACCGTTGGTT TCAAAAATAC GGTTATTCCC GCACAGGTTG CTGTAACGGA CATAGACGAT
GACGGCATCA TGGACATCAT CACCGGTAAC AGCGATCCCG ATGAAAGCAT TTCCATCATT
CAAAAAAATG CGTTTACGGG TTTTGATTAT TCTACAAAAA AAACACTCAG CAGTTCAAAA
GGGGTTACGT CTTTAGCCAT TGCCGATGTT GATCTGGACG GCAAAAAAGA TATAGCCTTT
ACTTATGGTG GTCAAGGCTA TTATTACGCA AGTTCAGAAG GATTTAATAA AGCCTTTGAA
ATATCGAGTG TTGCCACCAA TCTCGTGCTG GCCGGTAATT TCAGCAAAAA TGAAAAAACA
GATCTCATCC TGGCACATCC CGGTAGTTTA AGTGCATTCC GGGAAGGAAA TTCATATACG
TTTGAAGATA AAAATTTTAA AGAGGCCCCT GTTTCTTTTG TTGGCGGAGA TTACAACAGC
GATGGGAATA CCGACATTGC AGCTGTTTAC ATGGATGAAA AAAGCCTCAA TCACATTGCT
TTCTACACGA ATGACGGATC AGGCAATCTG CAATCTTATC CCTCGTTGCT TTCAACCGGA
TTCGGGGAAA AAACAGTCAT TGCTTCCGGA GACATCAATA TGGACGGGCA ACCGGACCTG
ATTGTATTTG ACCAGAAAAA AACGTACATC TACGCATACA TTAAAGCTTC ATCTATTGTA
CTCGGCACAT CCTCCATCAG CGTTGCCACT GTCTGCGAAG CCACTGCTGC ACCGGTAACA
CTCAACAACA TGGAAGGTAC CATCAGCTGG TTCAAAGACT CAAACGGGAA GGACAGCATA
CCCGGTGCCG ACCGTATTAT TCCCAAAGAT TATGTTGCTG CACCGTCTAC TACCTTATAT
GCCCGTGTCA GCTATGGTTC CTGTACCTCA GCCTTATCGC CGGTTACGTT TGCCGTTAAT
GCCGCACCGG CAGTTACAGC CAGTGCAAGC TACCTCAATC TTTGTCCGGG CGACAGTACA
ACGTTAACAA CCACAACCAC CGATGCAGGT ACCGCCTATT CCTGGTCGCC GAGATTTGAC
ATTAAAAAAC CGGACCTCGC CACCACAAAC GTAACACCCA AAACACTTCC TGTGCCGCTT
GAAACAGCTC AGAACCCAAC GTTTCCTTCG GAGAAAATGA ATGTGTTTAC CTACACGGTT
ACGGCAACTA AAAACGGCTG TTCGGCCAGC AGCAGTGTAA AAATCAACGT GTACAGTTTT
GTTGCCTCCC TGATTGAAAA AGACAGCAAA GACTCCATCT GTTCCGGAGA GCAGGTCGTC
TTTCAGCCAG CCATTAGCAA CGGTACCTTT TCTACCTATG TATGGAGCAA TACAAGCGGG
CTGCCAAACC CGGCCAACGG AGCAGCCAAT GCCGCGGTCA CACCTACCAA TACAACTACG
GCTGTTCAAA CGGTAACATA TACTATAGCG GGACAAACAA CTGCAGGGTG TGCTGTAACC
CGAAGTAAAT CTGTATACAT AAAGCCGGCC CCTGCGATTA CACCCAGTTC GCTTACCCGG
GCAATTGCCG GCAGTGGATT ATACACGCAG GCATTTACCG TTGCAGGCAG CACCAATCCT
GTTTTTACCG TCACCGGCAC ACTTCCCAAT GATTTCACAT TTGCGGGAAA TACCTTCAGA
GGAACACCGG CGGGTACCAA TGTAGGCAGC TATACATTTT CAATCACTGC TTCGCAGGCA
GGCAAATGCA GTTCCACAGC TCCTTTGACA TTTGTTATTG AAGACCTGGC ATCGCCTAAC
CTGCTGATGA ATCCGGTGTA TAAAAATGTA GGTGCTGATG CGTTCTATCT GCAGGCTGTT
ACGCAAAGTA CCGGATCGCT CAGCTATAAA GTCAAAGGCG CTACAGACCT TTGTTTAACG
ATTGCTTCAA ACGGACTGGT AGATAAAATT ACCTGCAGAA GCACACCGGA TTCCATTCCG
GTTATTGTTA CGCAGGCTGC TACTTCTAAA TACAGAGCCG CTACGTGGGA GTCGTATATC
AAAATTTCTC CAAACCCGAA TACAACGGGG CAATTAAATA CTGCGGGTAT TACACTGAAT
GAAACAAATG CTAAAATTAC TGTTTCCACC AATTCAGATG TAACTCCGTC AAAGATTGTA
TTCGTACAGC TCAGCAATAC AGATGTAGCC AATATAAAAG AAGATGGAAC AATAATACCT
TTTAAGGAAG GTACGATAGC CGTTGAAGTA CGCATACCGG CTACGTTAAA CTACGCTGCT
TTCAGCCGTG AATACATCCT TACCATCCAC TCAACGGCAC AGCGTCCGGC AATAGTTTCC
GATACCATTG TGATCACGAT CGGCCAGGAT ACCCTTATCA ATATTTTAGC CAATGATTAT
GGTGTTACAA GTCCGATTGA TCCTGCCAAA ACGGATATTG ACCTGGAAAA TACAGGTATT
CAGAATAAAT ATTATTCTCT TTCAATGGGT AATTTTTTAA TTGATATACA TGGCAATCTC
GAATACCGTG CCTTCAGCGG TTTTCTGGGT GAAGGCAAAC TTGCCTATAC CGTTACAGAC
TCTGCTGGTG TGCGCTCGGA AACCGGCTAT GTGTACATCA TTGTAAAAGA ACTGCTGGCA
ACACCTGCAC TTAAAGCAAA CGAAGTAATG ACGCCAAACA ACGACGGGCT AAACGATGGT
TTGGTCATTG CCTACGCGAA CTTACATTCC GCCAGTTCCT TAACCATCAT CGATGAAACC
GGCAACATAG TGTATGAAAC ATCAAACTAT CAAAACGACT GGAAAGGTGT TGACAAAAAA
GGCGATGTGC TTGAGCCTGG TGTATACTTT TATGTATATG AAGAAGAAGC CAGCGGCAGA
GCATTAAAAC AATACATTCA GATCATTAAA TAA
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| Protein sequence | MKPYNEILKQ LVKNHLMLLA ACVLLLLNAA ETKAQTPHID KIAPLSGDIS KTIVTISGNN
LVYKNLVPKV FFGTIPANIY SQSETEIKVT VPLGASYDHI TVVVSPTGTA ISEQFFQVLQ
ASPCDFTTPQ FNVAEIIATN TFTPVYHALA DVNGDRKPDL LVLSDNSRIS IYKNSSTPTN
VNFEKFFETT LLTTAVPASL AVADLNTDGV MDIVVGYSAG NRITILPGTT GTSFGTAAHI
TVGFKNTVIP AQVAVTDIDD DGIMDIITGN SDPDESISII QKNAFTGFDY STKKTLSSSK
GVTSLAIADV DLDGKKDIAF TYGGQGYYYA SSEGFNKAFE ISSVATNLVL AGNFSKNEKT
DLILAHPGSL SAFREGNSYT FEDKNFKEAP VSFVGGDYNS DGNTDIAAVY MDEKSLNHIA
FYTNDGSGNL QSYPSLLSTG FGEKTVIASG DINMDGQPDL IVFDQKKTYI YAYIKASSIV
LGTSSISVAT VCEATAAPVT LNNMEGTISW FKDSNGKDSI PGADRIIPKD YVAAPSTTLY
ARVSYGSCTS ALSPVTFAVN AAPAVTASAS YLNLCPGDST TLTTTTTDAG TAYSWSPRFD
IKKPDLATTN VTPKTLPVPL ETAQNPTFPS EKMNVFTYTV TATKNGCSAS SSVKINVYSF
VASLIEKDSK DSICSGEQVV FQPAISNGTF STYVWSNTSG LPNPANGAAN AAVTPTNTTT
AVQTVTYTIA GQTTAGCAVT RSKSVYIKPA PAITPSSLTR AIAGSGLYTQ AFTVAGSTNP
VFTVTGTLPN DFTFAGNTFR GTPAGTNVGS YTFSITASQA GKCSSTAPLT FVIEDLASPN
LLMNPVYKNV GADAFYLQAV TQSTGSLSYK VKGATDLCLT IASNGLVDKI TCRSTPDSIP
VIVTQAATSK YRAATWESYI KISPNPNTTG QLNTAGITLN ETNAKITVST NSDVTPSKIV
FVQLSNTDVA NIKEDGTIIP FKEGTIAVEV RIPATLNYAA FSREYILTIH STAQRPAIVS
DTIVITIGQD TLINILANDY GVTSPIDPAK TDIDLENTGI QNKYYSLSMG NFLIDIHGNL
EYRAFSGFLG EGKLAYTVTD SAGVRSETGY VYIIVKELLA TPALKANEVM TPNNDGLNDG
LVIAYANLHS ASSLTIIDET GNIVYETSNY QNDWKGVDKK GDVLEPGVYF YVYEEEASGR
ALKQYIQIIK
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