| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0523 |
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| Symbol | ccpA |
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| ID | 4185153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 601512 |
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| End bp | 602543 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638070528 |
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| Product | cytochrome C peroxidase |
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| Protein accession | YP_677150 |
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| Protein GI | 110636943 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1858] Cytochrome c peroxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00240388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATAAAGC AAAATACAAC GTGTACTATA TATACCAGAG GATGTTTTAT TTTCCTCTGG
TGTATACTTC TGTTATCGTG CCGAAGAGGA AATGACCCGG CAGATGAGAT CGCTGAGGGT
AATAAAATCA TCTCACTGCA GGTGCCGAAG GGATTGTTGT ATCCCGATGT TCCCGCAGAT
AACCAGCCGA CAAAAAACAG AATAGAATTG GGAAGGATGC TGTTCTTTGA TCCCATACTT
TCAAGAGACA GTTCGGTGTC GTGCTCTACG TGTCACCAGA CGGATAAGTT CTTTGCGGAT
AATTTAAAAG TGAGTGTCGG GATCGAAGGA CGAAAAGGCA CACGGAATGC GCCATCACTG
ATTAATGTTG CCTACCAGCC GTCTATGTTC TGGGATGGAG GTAATCCTAC GTTAGAGCAG
CAGGTGATCG CTCCGATTGA TAATCACGAT GAGTTTGACT TTGATGTAAA TTCCATTGTT
GCAAAGCTGA AGGTACATCC CCTGTATGCA AACCTGTTTC AGCAGGCGTA TGATCAGGAG
CCAGGCGTGT ATAGCCTTAC GCGTGCAATT GCCTGTTTTG AGCGGACGTT GCTTGCGGCG
GATTCCCGCT ACGATGATTA TCTGCAGAAC GGAAACGGGA ATGCGCTGAG TGCATCAGAG
ATCAGAGGGA TGAATTTATT CTTCAGCGAA GAGGGCGAAT GTTTTCATTG TCACCAGGGA
GCGCTGTTTA CCGATTACAG TTTCAGGAAT AACGGGCTGT ATATGCAATA TGCCGATTCG
GGAAGAGCGC GTATTACACA GGATCTTTCT GATATCGGAA AGTTTAAAGT GCCTTCGTTG
CGGAATGCGG AGATGACTGC TCCATATATG CACGACGGAA GTATTCAAAC ACTTGAGGAA
GTTGTTGAAC ATTACAGCAG GGGCGGTGTC CGGCATCCGA ATAAAAGCCC CATTATCCAG
CCATTGAATC TGAATGCGCA GCAAAAAGAG GATCTGGTCA ATTTTATTAA ATCATTAACA
GATAAACGAT AA
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| Protein sequence | MIKQNTTCTI YTRGCFIFLW CILLLSCRRG NDPADEIAEG NKIISLQVPK GLLYPDVPAD
NQPTKNRIEL GRMLFFDPIL SRDSSVSCST CHQTDKFFAD NLKVSVGIEG RKGTRNAPSL
INVAYQPSMF WDGGNPTLEQ QVIAPIDNHD EFDFDVNSIV AKLKVHPLYA NLFQQAYDQE
PGVYSLTRAI ACFERTLLAA DSRYDDYLQN GNGNALSASE IRGMNLFFSE EGECFHCHQG
ALFTDYSFRN NGLYMQYADS GRARITQDLS DIGKFKVPSL RNAEMTAPYM HDGSIQTLEE
VVEHYSRGGV RHPNKSPIIQ PLNLNAQQKE DLVNFIKSLT DKR
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