Gene CHU_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0522 
Symbol 
ID4185152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp600696 
End bp601493 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content43% 
IMG OID638070527 
Producthypothetical protein 
Protein accessionYP_677149 
Protein GI110636942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.582583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0215931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTTA AAAATCTACT TCAAATGAAA ACACTGATAA GATTCATATT ATTCGTTGCC 
CTTACGGGCT TTATGGTTTC CTGTAAGAAA GATAAAAAAG AAGAACCGGT TCCTGAAACT
CCGGTGCAGG CGTTAACACT AAGGCTTACG CCAATGGCCG GCGCAGATAC ACTGAAGTTT
AATACTTCCT TTACAACTGA AAATAATGTG CGGTATACAC TGGCGTCATT CAGGTATTAC
ATGTCTGATA TCCGTCTTGT TAAAAAAGAT GGAACGGAAC ACGCCCTTGC AGGAAAAGTA
TTGTTGATAA ATGCCAATAC ATCGGATTAT GCGCTGGGCA ATGTTCCTGC CGGTGATTAT
GCAGGAATCC GTTTTGCTGT AGGCCTGGAT GCTGTGACCA ATCACGCAGA TCCTACCGTG
TATCCAGCAG CACATCCATT AGCGATTCAA AGTCCGGGGA TACACTGGAG CTGGAATTCC
GGCTACATCT TTTTATCCAT GGAAGGAACG TGTGATACAA CTGCTGTTAA CAATGATGTG
CTGACCTTTG GACAATACAG CCATGGCATG TTCTTCCACA TAGGTATGGA CCCGTTGTTA
CGCAATGTAT CCCTTACCAA CAAAGCTTTT ACTATATCTG CAGATGCGCC TAAGGTATTG
TCTGTGCATT CAGATATCAA CAAGCTCTTT ACAGGCATTG CTCTGAAAAC AGAAAATGCT
TCGCATACCA TGGGCTCCAT GCCATTGGCT ACCAGAATGG CAGATAATAT ACCCGCCATG
TTTACCCTTA CCGAATAA
 
Protein sequence
MLFKNLLQMK TLIRFILFVA LTGFMVSCKK DKKEEPVPET PVQALTLRLT PMAGADTLKF 
NTSFTTENNV RYTLASFRYY MSDIRLVKKD GTEHALAGKV LLINANTSDY ALGNVPAGDY
AGIRFAVGLD AVTNHADPTV YPAAHPLAIQ SPGIHWSWNS GYIFLSMEGT CDTTAVNNDV
LTFGQYSHGM FFHIGMDPLL RNVSLTNKAF TISADAPKVL SVHSDINKLF TGIALKTENA
SHTMGSMPLA TRMADNIPAM FTLTE