Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0519 |
Symbol | |
ID | 4185149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 597110 |
End bp | 597916 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638070524 |
Product | hypothetical protein |
Protein accession | YP_677146 |
Protein GI | 110636939 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0818036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0227607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTTTTA ACGTTACTGT TATGAAATAC GCACTTATTA TCACACTTGC ACTTCTCGCT GCTGCCTGCA AAAAATCTGC AGCGGATGAT CCGTCTTCAC CGGCAAATAC CGTTGTTACA GCTCCTGTTA ATCTTCATTT ACATACCTAC ATCGGGGAAA ATGAAGTAGA TGGATATGAT ATTATTTACC GCACAACAGA AGGGAGAGAA ATGTCGCTAT CTATGGCTCA GGTATTTTTA TCGGACATTG AACTGGTAAA ACGCGACGGT ACTATTTATC CCATTAAGGA TACCATTATC TTAACAAACA TTATTGATCA GGTATATCGT TTGGGAAATG TTCCGGTAGG CAATTACAGA ACGATTCGTT TTAAAGCCGG ATTGTTACCT GCTATTAACG CACAAACATC AGGCGGGAGC GTTCCGTTGA ATGATAAGAG TATGTGGTTC AGCAATACTG CGCAGCAGAA TAATTATATT TTCATGAACT GCTCCGGCAA GATCGATACG TCGGCTGCAC TGGTTGGCAA GATGGCGCCG TTCACCTATA AGATCGGTAC CGATGCACAG TTAAAACAGG TTGTGATGCC CGATCAGAAT TACTCTGTGC AGCCAAATAC AACGGGCTAT GTGCATATGC TGGTAGATTA TTCGCAATTG TTTATTGGTG TTGACCTGAC GGATGCGGCT AACTTAAGCA TTACTACTTC CGAGCAGAAT TCATGGCCGG ACAATGGACA GGCCTGGCCG ATAGCGGTTA CGGTAGCCGA TAATATTGTG CATGCATTTA AATATGAAAA TGAATAA
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Protein sequence | MSFNVTVMKY ALIITLALLA AACKKSAADD PSSPANTVVT APVNLHLHTY IGENEVDGYD IIYRTTEGRE MSLSMAQVFL SDIELVKRDG TIYPIKDTII LTNIIDQVYR LGNVPVGNYR TIRFKAGLLP AINAQTSGGS VPLNDKSMWF SNTAQQNNYI FMNCSGKIDT SAALVGKMAP FTYKIGTDAQ LKQVVMPDQN YSVQPNTTGY VHMLVDYSQL FIGVDLTDAA NLSITTSEQN SWPDNGQAWP IAVTVADNIV HAFKYENE
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