Gene CHU_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0519 
Symbol 
ID4185149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp597110 
End bp597916 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content42% 
IMG OID638070524 
Producthypothetical protein 
Protein accessionYP_677146 
Protein GI110636939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0818036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0227607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTTTTA ACGTTACTGT TATGAAATAC GCACTTATTA TCACACTTGC ACTTCTCGCT 
GCTGCCTGCA AAAAATCTGC AGCGGATGAT CCGTCTTCAC CGGCAAATAC CGTTGTTACA
GCTCCTGTTA ATCTTCATTT ACATACCTAC ATCGGGGAAA ATGAAGTAGA TGGATATGAT
ATTATTTACC GCACAACAGA AGGGAGAGAA ATGTCGCTAT CTATGGCTCA GGTATTTTTA
TCGGACATTG AACTGGTAAA ACGCGACGGT ACTATTTATC CCATTAAGGA TACCATTATC
TTAACAAACA TTATTGATCA GGTATATCGT TTGGGAAATG TTCCGGTAGG CAATTACAGA
ACGATTCGTT TTAAAGCCGG ATTGTTACCT GCTATTAACG CACAAACATC AGGCGGGAGC
GTTCCGTTGA ATGATAAGAG TATGTGGTTC AGCAATACTG CGCAGCAGAA TAATTATATT
TTCATGAACT GCTCCGGCAA GATCGATACG TCGGCTGCAC TGGTTGGCAA GATGGCGCCG
TTCACCTATA AGATCGGTAC CGATGCACAG TTAAAACAGG TTGTGATGCC CGATCAGAAT
TACTCTGTGC AGCCAAATAC AACGGGCTAT GTGCATATGC TGGTAGATTA TTCGCAATTG
TTTATTGGTG TTGACCTGAC GGATGCGGCT AACTTAAGCA TTACTACTTC CGAGCAGAAT
TCATGGCCGG ACAATGGACA GGCCTGGCCG ATAGCGGTTA CGGTAGCCGA TAATATTGTG
CATGCATTTA AATATGAAAA TGAATAA
 
Protein sequence
MSFNVTVMKY ALIITLALLA AACKKSAADD PSSPANTVVT APVNLHLHTY IGENEVDGYD 
IIYRTTEGRE MSLSMAQVFL SDIELVKRDG TIYPIKDTII LTNIIDQVYR LGNVPVGNYR
TIRFKAGLLP AINAQTSGGS VPLNDKSMWF SNTAQQNNYI FMNCSGKIDT SAALVGKMAP
FTYKIGTDAQ LKQVVMPDQN YSVQPNTTGY VHMLVDYSQL FIGVDLTDAA NLSITTSEQN
SWPDNGQAWP IAVTVADNIV HAFKYENE