Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0517 |
Symbol | |
ID | 4185148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 596020 |
End bp | 597120 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638070523 |
Product | hypothetical protein |
Protein accession | YP_677145 |
Protein GI | 110636938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0241651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTCTT TATCGATAAG TATAAGTATT CAAATGAACA TGATAACAAA ATGTTGTTTG CTGCTGCTGT TTGCAGGAGT AAATACAATA CGTGTATCTG CGCAGTCAGA TTCAAGTATA ACAACCCCGG CCTGCCTTTC CTGTTTATGC AGTAAAGATG CCACACCCGC AGGTGTGATG ATCAGTCACG TACATCCAAA AGGAGAGTGG ATGTTATCCT ACCGCTATAT GGGAATGCGT GGAAAAGGAA TTGAGCAAAA CGGGCGGCCG GTTACAAACG ATCAGGTCTA CGATCAGGAT TACCTCATGT CTTCCGATAA CATGCATATG GACATGCATA TGCTGATGGC TATGTACGGG CTCACAAAAA ATCTTACGTT AATGGGTATG GTTGAATATA ACCGTTCAAC GATGAACATG CAGGCACCGG AAGGTTCTGC CCATGTGCAC AATGGCGTAC CTATGTCGTC GGGTATGGCG CATGACATGA AGGCTTCAGG CTTGGGGGAT GTATCTGTAA CAGCCCTGTA TGCATTGGTA AATTCTTTTA ATCATCACCT GCTTGTTTCC GGCGGTATTA CTATTCCTAC GGGATCGATA CAAACAAAAG GCGGTGCAGC AAGTATGTAT CCAGAGCAGC GCTATCCTTA TATGATGCAG CAGGGATCAG GTACCTGGGA TGTGCTGCCG GGTTTAACAT ATACCTTTCA GCACAATAAG ATCATGGCGA GTTCACAGCT GTGTGCTGCT ATACGTACAG GCTACAATAC AGTCGGATAT AAACTCGGAA ATAAATATTC CTTTAATAAC TGGGTTGGTT ATCGCTGGTT GGATTGGTTC AGCACATCCT TACGTGCAGA AGCCAATACA ACAGGCAGTA TCAGCGGTTC AGACCCTACG TTATATGCAT ACAATGAACC TTCGGCAAAT CCATATAATT ACGGCGGACA AACAATTACA GGTTATGCCG GTGTGAATTT CTATTTCTTA GGTAAAAATA AAATCGGAAT AGAAGGCGGT TTGCCTTTAT ATCAGAAAGC CAATGGCATT CAAACGGCTG CTTCTTCAAC GATTCATTTA AATTATACAC TTGTCTTTTA A
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Protein sequence | MYSLSISISI QMNMITKCCL LLLFAGVNTI RVSAQSDSSI TTPACLSCLC SKDATPAGVM ISHVHPKGEW MLSYRYMGMR GKGIEQNGRP VTNDQVYDQD YLMSSDNMHM DMHMLMAMYG LTKNLTLMGM VEYNRSTMNM QAPEGSAHVH NGVPMSSGMA HDMKASGLGD VSVTALYALV NSFNHHLLVS GGITIPTGSI QTKGGAASMY PEQRYPYMMQ QGSGTWDVLP GLTYTFQHNK IMASSQLCAA IRTGYNTVGY KLGNKYSFNN WVGYRWLDWF STSLRAEANT TGSISGSDPT LYAYNEPSAN PYNYGGQTIT GYAGVNFYFL GKNKIGIEGG LPLYQKANGI QTAASSTIHL NYTLVF
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