Gene CHU_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0517 
Symbol 
ID4185148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp596020 
End bp597120 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content43% 
IMG OID638070523 
Producthypothetical protein 
Protein accessionYP_677145 
Protein GI110636938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0241651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCTT TATCGATAAG TATAAGTATT CAAATGAACA TGATAACAAA ATGTTGTTTG 
CTGCTGCTGT TTGCAGGAGT AAATACAATA CGTGTATCTG CGCAGTCAGA TTCAAGTATA
ACAACCCCGG CCTGCCTTTC CTGTTTATGC AGTAAAGATG CCACACCCGC AGGTGTGATG
ATCAGTCACG TACATCCAAA AGGAGAGTGG ATGTTATCCT ACCGCTATAT GGGAATGCGT
GGAAAAGGAA TTGAGCAAAA CGGGCGGCCG GTTACAAACG ATCAGGTCTA CGATCAGGAT
TACCTCATGT CTTCCGATAA CATGCATATG GACATGCATA TGCTGATGGC TATGTACGGG
CTCACAAAAA ATCTTACGTT AATGGGTATG GTTGAATATA ACCGTTCAAC GATGAACATG
CAGGCACCGG AAGGTTCTGC CCATGTGCAC AATGGCGTAC CTATGTCGTC GGGTATGGCG
CATGACATGA AGGCTTCAGG CTTGGGGGAT GTATCTGTAA CAGCCCTGTA TGCATTGGTA
AATTCTTTTA ATCATCACCT GCTTGTTTCC GGCGGTATTA CTATTCCTAC GGGATCGATA
CAAACAAAAG GCGGTGCAGC AAGTATGTAT CCAGAGCAGC GCTATCCTTA TATGATGCAG
CAGGGATCAG GTACCTGGGA TGTGCTGCCG GGTTTAACAT ATACCTTTCA GCACAATAAG
ATCATGGCGA GTTCACAGCT GTGTGCTGCT ATACGTACAG GCTACAATAC AGTCGGATAT
AAACTCGGAA ATAAATATTC CTTTAATAAC TGGGTTGGTT ATCGCTGGTT GGATTGGTTC
AGCACATCCT TACGTGCAGA AGCCAATACA ACAGGCAGTA TCAGCGGTTC AGACCCTACG
TTATATGCAT ACAATGAACC TTCGGCAAAT CCATATAATT ACGGCGGACA AACAATTACA
GGTTATGCCG GTGTGAATTT CTATTTCTTA GGTAAAAATA AAATCGGAAT AGAAGGCGGT
TTGCCTTTAT ATCAGAAAGC CAATGGCATT CAAACGGCTG CTTCTTCAAC GATTCATTTA
AATTATACAC TTGTCTTTTA A
 
Protein sequence
MYSLSISISI QMNMITKCCL LLLFAGVNTI RVSAQSDSSI TTPACLSCLC SKDATPAGVM 
ISHVHPKGEW MLSYRYMGMR GKGIEQNGRP VTNDQVYDQD YLMSSDNMHM DMHMLMAMYG
LTKNLTLMGM VEYNRSTMNM QAPEGSAHVH NGVPMSSGMA HDMKASGLGD VSVTALYALV
NSFNHHLLVS GGITIPTGSI QTKGGAASMY PEQRYPYMMQ QGSGTWDVLP GLTYTFQHNK
IMASSQLCAA IRTGYNTVGY KLGNKYSFNN WVGYRWLDWF STSLRAEANT TGSISGSDPT
LYAYNEPSAN PYNYGGQTIT GYAGVNFYFL GKNKIGIEGG LPLYQKANGI QTAASSTIHL
NYTLVF