Gene CHU_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0516 
Symbol 
ID4185147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp595578 
End bp595985 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content38% 
IMG OID638070522 
Producthypothetical protein 
Protein accessionYP_677144 
Protein GI110636937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.900425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTATCC AGAACAAACT TTTTAGCTTT GAACGGATGA AAAAAGGCTT TATCATATTG 
TTGGTTTTAT TTATACTGCT GCAAAGCAGT ATAAAATCAC TGTATGTAGC CTACTACAAC
ATCAACCAGG ATTATATTGC TTCTGTTCTT TGTATCAATA AAGCAAAACC GGCATCAACG
TGTAACGGTA AGTGTTATCT GATCAAAAAA ATGGAGCAGC AGGAAAAACA GGAACAGACA
ATACCTTCTG TTTTAAAAGG TCTTGAAGAA GTTGTATTGT TTTGTACAAC ACAGTCTTTT
GCTGTTGCAC CGGTAGTTAC AGAAATACCA CAGCTAACGT CATTGGATGC GTATCAGATG
CATGCGTACA CATCGCCTGC AGACCGTATC ATTCAGCCTC CTCAGTAA
 
Protein sequence
MFIQNKLFSF ERMKKGFIIL LVLFILLQSS IKSLYVAYYN INQDYIASVL CINKAKPAST 
CNGKCYLIKK MEQQEKQEQT IPSVLKGLEE VVLFCTTQSF AVAPVVTEIP QLTSLDAYQM
HAYTSPADRI IQPPQ