| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0496 |
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| Symbol | |
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| ID | 4186245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 577955 |
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| End bp | 578617 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638070503 |
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| Product | DNA uptake-like protein |
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| Protein accession | YP_677125 |
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| Protein GI | 110636918 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0194671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTTTC AGTCAGCTAA ACACGCTAGC GGTTCCAGCA ACCGTGAAGC AAAAGGTTTT
TTATTTCTCA TTTTTATTCT GATCACACCA TTTTTACTGC AGTATGGCTA TCGCTATCTG
TTCTACACAC CACAGCAGCC GGATCTTTCA ACGATTCAGC TATTGACAGA TTCCTGCGAA
TCCACAGCGA CAGATGGTCC GTATACAAAA TATTCAAAAG AAGGAAAAAG TACGAAGTGG
AAAAAACCGC TTGCAACAAA AGACACCCGG CGCGGCAAAC AGAAGATGGT TGATCTTAAC
ACCGCTGATT CTTCAGCGCT GGAGGCCCTG CCTGGGATTG GTCCGGCGTT TGCGAAACGC
ATCATTAAAT ACCGGACACT GCTGGGCGGG TATGTAAAAG CAGAACAGCT GAAAGAAGTG
TATGGCATGC CTGAAGAAAC ATATGTAAAA ATTAAACCGC TGTGTACGTT GAGTATAGCT
GCGGTGAAAA AGATTCCCGG AGATTCGCTG TGGCTGCTGC CGTATAAATT TTATCATCCC
TATCTGAGCA AAGAGCTGAA GGCTGCCATT GTGCAGAAGA AAAAAACGCC GTATGATGCG
GATGTCTTGC GTGTGCTGTT GAAGAGTAGT GATGAGCGGT TGGAATGGTA TCTGGTGTAT
TGA
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| Protein sequence | MSFQSAKHAS GSSNREAKGF LFLIFILITP FLLQYGYRYL FYTPQQPDLS TIQLLTDSCE
STATDGPYTK YSKEGKSTKW KKPLATKDTR RGKQKMVDLN TADSSALEAL PGIGPAFAKR
IIKYRTLLGG YVKAEQLKEV YGMPEETYVK IKPLCTLSIA AVKKIPGDSL WLLPYKFYHP
YLSKELKAAI VQKKKTPYDA DVLRVLLKSS DERLEWYLVY
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