| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0493 |
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| Symbol | ppiC |
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| ID | 4185478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 574197 |
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| End bp | 574847 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638070500 |
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| Product | peptidylprolyl isomerase A (peptidyl-prolyl cis-trans isomerase) |
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| Protein accession | YP_677122 |
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| Protein GI | 110636915 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.867584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATATA TGAAACAACT ACTTTTAACC CTATTCGCTT TTGTATCCTT ATTTACAATG
CAGGCGCAAA CCGCAACAGC ACCAGTTCTT CCCAAAGAAG ATTATGTCGT AACGATTTCT
ACATCGTATG GCAATATTGT GTTATTGTTA TATGATCAGA CGCCGTTGCA TAAAAAGAAT
TTTATTGATC TGGCTCAGAA ACATTTTTAT GATGGCACTA CCTTTCACCG GGTGATTCTT
GATTTTATGA TTCAGGGTGG AGATCCGAAT TCAAAAGATT CAATCACCAG CAACGATGGT
ATTGGTGGTC CGGGATATAC CATTCCGGCA GAATTCAATC CGAACCTGAA ACATGATAAA
GGCGCATTGG CGGCGGCACG TATGGGAGAT GAGGCTAATC CGCAGCGCGC ATCCAGCGGC
TCTCAGTTTT ACATTGTTCA GAATAAAAAG GGAACACCAT TCCTGGATAA CAGTTATACG
GTGTTCGGAC AAACCATCAG CGGCTTTGAT GTGATCGATA AGATCGCACA GGTACAGGTG
GATGGTGCAA GCAGACCGCT AAAAAATGTA CCGATGAAGG TTACGGCTGT TAAAATGAAA
ACAAAGAAGA TCATTAAGCT GTATGACTGC GAATGGTTTT ATAAGGTGTA A
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| Protein sequence | MKYMKQLLLT LFAFVSLFTM QAQTATAPVL PKEDYVVTIS TSYGNIVLLL YDQTPLHKKN
FIDLAQKHFY DGTTFHRVIL DFMIQGGDPN SKDSITSNDG IGGPGYTIPA EFNPNLKHDK
GALAAARMGD EANPQRASSG SQFYIVQNKK GTPFLDNSYT VFGQTISGFD VIDKIAQVQV
DGASRPLKNV PMKVTAVKMK TKKIIKLYDC EWFYKV
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