Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0486 |
Symbol | natB |
ID | 4185471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 567286 |
End bp | 568545 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638070493 |
Product | ABC-type Na+ efflux pump, permease component |
Protein accession | YP_677115 |
Protein GI | 110636908 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGA TCTGGATTGT TCTGAAACAG GAATATGTGA ACCGCATTCA AAAACGTTCG TTCCTTGTAC TTACGTTGCT TGGCCCGGTT ATATCGCTGT GTATGTTATT GATTCCCGTT TACCTGAGCC TGAATACAAC GGAACGTATA CATGTGTGGC TGCAATCGCC TGATCAAAAT CAGACAGGCG GTAATTATGC AGATGAAACA TTTGTTTTTC ATCCTGTAAA AAATAACAGC AGTAAAGAAA CGGAAGCAGA CTTTATGCTG GCGGGCAGGC ATGCGGATGT GCTGGTGTAT TATTCCGTTG AAGGCAAGCG TGTTGTTGTG TGGGACAAAA AAGGCTTGTC AGCCGCTGAA CAGTGGAAAC TTAAAAACAA GGTTCAGGAT ATGTATGCGA AAAGTATTGT TTCCGCCTAT CTGCCTCAGC TGGCTGCAGC GCCGGATATG CAGTATATAC CTCTGACAGA AGAACCGGAA CATACAGATC TGTTTCAGCT GGTTGGTTTA TTCTGTGCCA TCGTTATTTA CTTTTTTATT TTCTATTACG GTGTGCAGGT AATGAAAGGG ATTGTTGATG AAAAAGTCAA TCGGGTAGTA GAAGTAATCT TATGTTCGGT GAAACCTTTT AACTGGATGA TGGGGAAAAT ACTGGGTATT GCTGCGGTGT GCCTCACACA GTTTGGTTTC TGGGCCTTGA TTTATGTGCT TGTCGGTTTG AAATTTCAAC AGCGATATGG AAATGCACTT ACACAGTTTA CGGATAAAAA TATGAATGAC ACACTGCATG TAAGCAAAGA TGCCTGGCAG GCACTGGAGT GGAATGTGTT TGCGGAAAGT TTTGCAAGCT TGCCGTTACT GCAGATCGGT GTGTGTTTCT TTGCGTTCTT TATATTGGGA TATTTATTGT ATGCATCGCT GTTTGCGGCC ATTGGAGCGA TGACAGATAA TGAAACCGAT ACACAGCAGT TTACCTTTCC AATCACCGCG CCGTTATTTA TTACCTTCCT GTTTGCCGGC TTTATTATCA GCGACCCGGA TGCACAGCTG TCTGTTGTGC TGTCGTATTT TCCGTTAACG TCCCCCGTAG CCATGATGCT GCGCATTCCT TTCGGTGTTT CGAATTGGGA AATTGCTGCT TCTTTACTGA TACTCGCTTC AACATTTGTA CTGGCTGTTT ACATGGCTGC ACAGGTATTT AAGCGTGGTG TGCTGCAGTA TGGAAAAGCG ATGGGGTGGA AGGATATTTT AGGATTTTAA
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Protein sequence | MKQIWIVLKQ EYVNRIQKRS FLVLTLLGPV ISLCMLLIPV YLSLNTTERI HVWLQSPDQN QTGGNYADET FVFHPVKNNS SKETEADFML AGRHADVLVY YSVEGKRVVV WDKKGLSAAE QWKLKNKVQD MYAKSIVSAY LPQLAAAPDM QYIPLTEEPE HTDLFQLVGL FCAIVIYFFI FYYGVQVMKG IVDEKVNRVV EVILCSVKPF NWMMGKILGI AAVCLTQFGF WALIYVLVGL KFQQRYGNAL TQFTDKNMND TLHVSKDAWQ ALEWNVFAES FASLPLLQIG VCFFAFFILG YLLYASLFAA IGAMTDNETD TQQFTFPITA PLFITFLFAG FIISDPDAQL SVVLSYFPLT SPVAMMLRIP FGVSNWEIAA SLLILASTFV LAVYMAAQVF KRGVLQYGKA MGWKDILGF
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