Gene CHU_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0486 
SymbolnatB 
ID4185471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp567286 
End bp568545 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content43% 
IMG OID638070493 
ProductABC-type Na+ efflux pump, permease component 
Protein accessionYP_677115 
Protein GI110636908 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA TCTGGATTGT TCTGAAACAG GAATATGTGA ACCGCATTCA AAAACGTTCG 
TTCCTTGTAC TTACGTTGCT TGGCCCGGTT ATATCGCTGT GTATGTTATT GATTCCCGTT
TACCTGAGCC TGAATACAAC GGAACGTATA CATGTGTGGC TGCAATCGCC TGATCAAAAT
CAGACAGGCG GTAATTATGC AGATGAAACA TTTGTTTTTC ATCCTGTAAA AAATAACAGC
AGTAAAGAAA CGGAAGCAGA CTTTATGCTG GCGGGCAGGC ATGCGGATGT GCTGGTGTAT
TATTCCGTTG AAGGCAAGCG TGTTGTTGTG TGGGACAAAA AAGGCTTGTC AGCCGCTGAA
CAGTGGAAAC TTAAAAACAA GGTTCAGGAT ATGTATGCGA AAAGTATTGT TTCCGCCTAT
CTGCCTCAGC TGGCTGCAGC GCCGGATATG CAGTATATAC CTCTGACAGA AGAACCGGAA
CATACAGATC TGTTTCAGCT GGTTGGTTTA TTCTGTGCCA TCGTTATTTA CTTTTTTATT
TTCTATTACG GTGTGCAGGT AATGAAAGGG ATTGTTGATG AAAAAGTCAA TCGGGTAGTA
GAAGTAATCT TATGTTCGGT GAAACCTTTT AACTGGATGA TGGGGAAAAT ACTGGGTATT
GCTGCGGTGT GCCTCACACA GTTTGGTTTC TGGGCCTTGA TTTATGTGCT TGTCGGTTTG
AAATTTCAAC AGCGATATGG AAATGCACTT ACACAGTTTA CGGATAAAAA TATGAATGAC
ACACTGCATG TAAGCAAAGA TGCCTGGCAG GCACTGGAGT GGAATGTGTT TGCGGAAAGT
TTTGCAAGCT TGCCGTTACT GCAGATCGGT GTGTGTTTCT TTGCGTTCTT TATATTGGGA
TATTTATTGT ATGCATCGCT GTTTGCGGCC ATTGGAGCGA TGACAGATAA TGAAACCGAT
ACACAGCAGT TTACCTTTCC AATCACCGCG CCGTTATTTA TTACCTTCCT GTTTGCCGGC
TTTATTATCA GCGACCCGGA TGCACAGCTG TCTGTTGTGC TGTCGTATTT TCCGTTAACG
TCCCCCGTAG CCATGATGCT GCGCATTCCT TTCGGTGTTT CGAATTGGGA AATTGCTGCT
TCTTTACTGA TACTCGCTTC AACATTTGTA CTGGCTGTTT ACATGGCTGC ACAGGTATTT
AAGCGTGGTG TGCTGCAGTA TGGAAAAGCG ATGGGGTGGA AGGATATTTT AGGATTTTAA
 
Protein sequence
MKQIWIVLKQ EYVNRIQKRS FLVLTLLGPV ISLCMLLIPV YLSLNTTERI HVWLQSPDQN 
QTGGNYADET FVFHPVKNNS SKETEADFML AGRHADVLVY YSVEGKRVVV WDKKGLSAAE
QWKLKNKVQD MYAKSIVSAY LPQLAAAPDM QYIPLTEEPE HTDLFQLVGL FCAIVIYFFI
FYYGVQVMKG IVDEKVNRVV EVILCSVKPF NWMMGKILGI AAVCLTQFGF WALIYVLVGL
KFQQRYGNAL TQFTDKNMND TLHVSKDAWQ ALEWNVFAES FASLPLLQIG VCFFAFFILG
YLLYASLFAA IGAMTDNETD TQQFTFPITA PLFITFLFAG FIISDPDAQL SVVLSYFPLT
SPVAMMLRIP FGVSNWEIAA SLLILASTFV LAVYMAAQVF KRGVLQYGKA MGWKDILGF