| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0461 |
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| Symbol | ispA |
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| ID | 4186328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 541540 |
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| End bp | 542517 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070468 |
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| Product | geranyltranstransferase (farnesyl-diphosphate synthase) |
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| Protein accession | YP_677090 |
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| Protein GI | 110636883 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.215839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACTTA CTACGGAACG ATTAACCAAA GACATTTCAA AAGCTATTTC AAAAGCTGAA
TTTGGTAAAG AACCCACAGA ACTATACGAA CCGATCCGAT ACATTATGGA TTTAGGAGGA
AAGCGCATGC GCCCGCTCCT GACCATTCTG TCTAATTATA TCTTCACCGA AGATACGAAT
AACGTTATGA ATGCTGCCAT TGCGGTTGAA GTGTTCCACA ATTTTACGCT CATGCACGAT
GATATCATGG ACAACGCTCC CTTGCGCAGA GGAAAGGCAA CCGTGCATGC AAAATGGAAT
ACCAACATCG CAATCCTTTC CGGTGATGTA ATGCTGGTTG AAGCATACAA ACAATTGATG
ACCATTGATG AGAAATACCT GAAACAGGTG CTGGATCGTT TTAACGAAAC AGCTGCAGGT
GTTTGTGAAG GACAGCAGTT TGATATGAAT TTTGAATCGC TGCCTACTAT TTCGGTTGAT
GATTATATTA ACATGATCCG CCTGAAAACT GCTGTGTTAT TAGGTTTCAG CATGGAGCTT
GGCGGTATTC TTGGAGATGC GGACGAAAAA AGCTGTACGT ATTTAAACAC GGTTGGAATC
TCTGCCGGCA TTGGGTTTCA GTTAAAAGAT GATCTGCTGG ATGTGTATGG TGACGCTGCT
ACCTTTGGTA AACAGGTTGG CGGTGATATC CTTGCAAACA AAAAAACGTT TTTACTGATC
CGTGCGCTTG AAAAAGCAGC AGGCAAAACA AAGAAAGATC TGGAAAAGCT ATTGACGGAT
AAAACCATTT CAGACAAGGC TAAGATTGAA GGTGTAACCA ATATCTACGA TCAGTTAGGC
ATTAAAGAAG AAACGGAAGC ATTGATTCAG CAGCATTTTA ATACAGCTAT TGAGTCACTG
GGCAAAGTAA AAGGATCTAT TTTCCGCAAA CATTATATTA AAGATTACCT GCTTGCACTC
ATTGGCCGCG AACAATAA
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| Protein sequence | MLLTTERLTK DISKAISKAE FGKEPTELYE PIRYIMDLGG KRMRPLLTIL SNYIFTEDTN
NVMNAAIAVE VFHNFTLMHD DIMDNAPLRR GKATVHAKWN TNIAILSGDV MLVEAYKQLM
TIDEKYLKQV LDRFNETAAG VCEGQQFDMN FESLPTISVD DYINMIRLKT AVLLGFSMEL
GGILGDADEK SCTYLNTVGI SAGIGFQLKD DLLDVYGDAA TFGKQVGGDI LANKKTFLLI
RALEKAAGKT KKDLEKLLTD KTISDKAKIE GVTNIYDQLG IKEETEALIQ QHFNTAIESL
GKVKGSIFRK HYIKDYLLAL IGREQ
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