| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0455 |
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| Symbol | |
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| ID | 4186322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 532120 |
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| End bp | 533811 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638070462 |
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| Product | pectate lyase-related protein |
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| Protein accession | YP_677084 |
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| Protein GI | 110636877 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAT TATGTTGGTT TGTTAAAACG GTCGGGTACA TTTTTCGTTT CAATACTAAT
ACGGTCCGGT TACCATCTAT GAGAACACGC TTTCTTGTGC TACTATATTG CGCTACCTGT
TTTTACACAA AAGCTTTTAT TTACTACGTC GATCCCAACA ATGGCGGCTC CAACAGTAAT
TCGGGCCTGA TCGGCTCCCC CTGGGCAACC ATTCAAAAGG CGGCATCCAC CGCACAGGCA
GGTGATACAG TATATGTACA GACAGGTACG TATGCTGAAA AAGTAGCATT TAATCATTCC
GGCACCGAAG ACGCGTTGAT CACATTTATT GGGGTCGGTT CTGTAGTGGT ACAGGAGCCT
GCAAACACAA CCGTATGGTC GGGTACGTTT ACTGTTACTA ATAAAAGCTA TATCCGCATT
CAGCATTTCA ACATTCAGAA TGCTTACTGG TTTGGCATTT ATGTGGAATC CAGCGATCAT
ATTTATGTAG AAAATAATTC TACCTACAAT ACAGGTGCAT CGGGCATCAG TGTCTGGCAT
TCATCGCATG TATATGCCGC GCACAATACG GTGCGTAAAG CCTGTTATCA GAGCCTTTCA
ACGGGTTCGC AGGAATGCAT TACTTTTTCC GGTGTGTCGG ATTTTGAAAT CCATCACAAT
GAAATCTATG AAAGCGGAGG TTCAACAAAC GGTGGCGAAG GGATTGATGC GAAGGAAGAT
TGTGCCAACG GAAAAATATA TAACAACATG GTACACGATC TGATTCGTTT GGGAATCTAC
ATTGATTGCT GGAACAAGAC GCTGCATGAT ATTGACATTT ATAACAATAA AGTGTTTCAA
TGTAAAGAAG GGATCGTAAT TTCTTCTGAA GATGGCGGTA CCGTTAGTGA TGTACGTGTA
TTCAATAATA TTCTGTACAG CAACGCACAT TTCGGAATTA CTGTTGCTGA TTATGTGCTG
AACGGTCCGC GCAAAAATAT CTCTATTATG AATAATACAA TTTATAATAA TGGCTTTGGT
GATGCGAATA CCGGATGGGG TGGCGGCATT ATTATTCTGA CAGCGAATGT GTCTGATGTG
GCAGTCTTTA ATAACATTGT TTCGGAAAAC GATGCCATGC AGATCTCCGA TAAATCAGGC
CGGGCAACAG TATCTGTAAC CAATAATCTT ATCTATGGCT ACCGCGGCCA TAACTGGACC
AATGAAGTAA AAGGTACAAA TGCTGTGGAA AGTAATCCGC TGTTTAGAGA TGTAAATGGC
GCAGATAATA TTTCGGGGAA TGCAGACGAT GATCTGAATG TGACGTCTGA AAGTGCTGCG
ATCAACCACG GGATAAATAC CAATGCACCT TCATTTGATT TTAATTATTA CCAGCGGCCG
GCTGAAAATG TTGCAGATAT CGGGGCATAT GAATCAAACA GTATTCCGTT GACGAATAAA
AAGATCAGTC CTGCAGCAGA ACAATTGATC CAGGTGTATC CCAATCCCAG CAATACAGGT
ATCTTTAATG TGAAATGCAT CAAGCCTGTC GATCGTATGG AAATTGCTGA CATGACGGGC
ACCATTATCC AGTGTTTTAC TTCACCCAAT GAAACAATAC TGCATGTGGC ACTATTGAAA
CCGGGTATGT ATCTGATGCG TGTTTATTCG CAGGATATTT GTCAGGTATA TAAAATAATT
AAATCAGATT AA
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| Protein sequence | MNRLCWFVKT VGYIFRFNTN TVRLPSMRTR FLVLLYCATC FYTKAFIYYV DPNNGGSNSN
SGLIGSPWAT IQKAASTAQA GDTVYVQTGT YAEKVAFNHS GTEDALITFI GVGSVVVQEP
ANTTVWSGTF TVTNKSYIRI QHFNIQNAYW FGIYVESSDH IYVENNSTYN TGASGISVWH
SSHVYAAHNT VRKACYQSLS TGSQECITFS GVSDFEIHHN EIYESGGSTN GGEGIDAKED
CANGKIYNNM VHDLIRLGIY IDCWNKTLHD IDIYNNKVFQ CKEGIVISSE DGGTVSDVRV
FNNILYSNAH FGITVADYVL NGPRKNISIM NNTIYNNGFG DANTGWGGGI IILTANVSDV
AVFNNIVSEN DAMQISDKSG RATVSVTNNL IYGYRGHNWT NEVKGTNAVE SNPLFRDVNG
ADNISGNADD DLNVTSESAA INHGINTNAP SFDFNYYQRP AENVADIGAY ESNSIPLTNK
KISPAAEQLI QVYPNPSNTG IFNVKCIKPV DRMEIADMTG TIIQCFTSPN ETILHVALLK
PGMYLMRVYS QDICQVYKII KSD
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