| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0422 |
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| Symbol | |
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| ID | 4185428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 493455 |
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| End bp | 496661 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638070430 |
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| Product | hypothetical protein |
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| Protein accession | YP_677052 |
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| Protein GI | 110636845 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02608] delta-60 repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.248115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TACTGTTTGC TGTGTATGTA TGTTTAATAG TTTCTATATG TAACGGGCAA
ACTGTTACCG GCTTAGATTA CACGTTTAAT AATTCGGGGT ATGTAGAAGA TAAATCCGGC
CCTGTATACA TTAAACATGT TGTACTGACT GATGGATCAA TTATTCAACT TGGCACCATT
TTTCCCAATG CATCTCAACG TTTTGGATAT GTAAATAAAT TAAATGCAAA TGGTTCTATA
AATACAGATT TTAATTTACC TGTTTCCGCT TATCCCAATG CATTATCTTT TAGAAATAAT
GAAAACTCTT ATTTAACATC CATCATAACA CAAACGGACG GAAAAATTAT TGTTGGAGGA
ATGTCTGAAT ATAACGAAAC AATAGACGGC ACAACCTATT CCTTTTCTGA TATTGCTTTA
GCCCGCCTCC TGCCTGACGG AAGTCTTGAT CAAGCTTTTG GCATAAATGG TAAATTAGTT
TTGCCTTTTG GTAAAGCGCA AAACAAACTG ACAGATATTG CATTATCAAC AACAGGAGAA
ATAATTATTG CAGGAGAATA CTCAGACAAT ACGCCCATGC AAACGTATGT AATGCGTTTA
ACTGAAGATG GAAGTATGGA TCAATCTTTT GGAACAAATG GTTTATGGAC AAGTTCTTTT
ATGAGCAATA CGTTCGGTAC CCAAATTGAA ATGGACATTT ATGACGAAGT AATGGTCGCT
TCAAATTCAG GTTTTGATAC TGTTATTGTC GCACGTATAC TTATCAATGG AACACTGGAT
GGAACGTATG GCACTAATGG ATTTTCAACA ATAAATATTT TAGAACCTAT TGTTGGCAAT
CGTTCTCAGA TGCGTGACAT GCTCATTGAT TCAAACGAAG ATGTGTTCTT AGGTGTAGTA
ATGACAGGTT CAAATAATCT GCCTCCTAAA GCATCTGTTT TCAAACTCAA TTATACGGGC
TCACTTGTTT CTTCTTTTGG TTCTAATGGA CATTTTGAGT TTGCAGAAGG ATATCACTAT
GCTATGGCAT TTACTCCGGA AAATAAAATT ATTTCTGCTG TGATGCGTGT TGATGGTTTA
CCTTTTTTTT ATACAACAAC AAAAGACGGA CAAATAGATT CTTCTCCTGA ATATGATTAT
ACATTAGCCA GTGAATTCTT TTCGGGTTTA AATGCGTATG TCCGTTTAGA AGACATAACC
GTTTTAGCTG ATGGAAAAAT TGTTGCAACA GGATACACAG GTTCAAAAAG CAGTTCACTT
GCCCAAACCG GCATTTCTAT TCGATTAGAA AAAATAAATC CTGAATCAGC TACGTGTGCA
TACCAAAACA AACTTGTTGG TTTTTATCGT CAGCTTCAAG ACGTTTGTTA TGATGCGCAG
GGAAATTTTT TTGCTACCGA TCTTAACAGA CATATTATTA AATTCAATGC AGCAGGTACA
GTTGTTAAAA CATGGATAAG GAACACAAAA AATGAATCGG AAAATTATCC TCGTATTGCA
AGTGATAACG CCGGAAATAT TTTTTCAATC GCAGGAAATT CTATAAATAA ATTCAGCAAT
GACGGCATGC TGCTTATAAG TTGGGGAACC CTGGGTGCAG GCAATGGCCA ATTAAACTAT
CCCGGAGATA TTGCAATTGA TTCAGATCAA AATGTATACG TTCTGGATGT GAACAATAAT
CGCATCCAGA AATTTGACAA CAATGGAAAT TATCTTCTTC AATGGAATTC AAGGGAAAGC
AATACTCAAC TCATGGCTAT ATGCATTGAT TCTGATAACA ATGTGTATGT TTCATCTGCC
TATTCTCATG CACTTCATAA ATTTAATTCT TCCGGCACGT TCATTCAATC CTTTGATTTA
GGCACTAAGT ATTGTGAATC CATTGATTAC AATCCAATCA ACAACTTACT CTATGTGATT
AATTATGATT TAATGACCTT CTCTACTTCA GGTGTATTAC AGAATACCAT TGAAACGATA
GCCAGTTATG ATATACCTAC GCATGCAATA ATTAAAACTG TTGCAGTAAA TAAAACCAAT
GGAAGTTTTG CAGTAACCTC TATAGGAGAT TATAATATTC ATCTTTTTAA TTCTGCCAAT
ACACTTGAAA AAATATTGGG GGGCTATAAC AGACTTGAAG GAAATTTTGG CAATGCAACA
GCTTTTACTG CTGACCTGAA CGGCAATGTG TATGTAGCAA ATGACAGACG TGAAATACAG
AAGTTCTCTG CTGGAAATAC GTATTTACTT AAGTGGGGCG GACAAGGATC TGCTGATGGA
AAATTCAATG CAGTCACGGA CATGGCTATT TCTAAAAACA ATATTATTTA CATTGTTGAT
TCAACCAATA ATTCCATCCA ATGTTTTGAT CTGAATGGAA ACTTTATAAG AAAATGGGGA
ACAAAAGGTA CTTCAAGCGG GCAATTCAAT CAGCCCTATC GTATTGTAAT TGATCCGCAA
GGTTTCGTTT ATGTGTTTGA CAAAGGCAAC TGCAGATTAC AAAAATTCAC TTCTGATGGT
ACTTTTGTTT CAACATTAAC AATTTGTGTC GCAAATGAAA TGAATCCTTT TGAGTATGCA
TTTTATCTTA TGGCAGATTC CCAATCTAAC ATTTATTTTT CTGTGCCGAA TGCCGGTTCT
GTTATCAGAA AAATAAATTC ATCGGGCTTT CTTGTTGGTT CCTTTTCCCT GCTCAATGCA
TCCGGTGATT ATCAGGATTT ATATAATAAA ATTTGCCTTG CAGGTGATCA TTTTTATCAG
ATCAATACAT CAAATCTTTT ATTATCTAAA TTCTCGTTAG ACGGTAAATT TATTTCTGCC
TGCGATTTTA CTGCTGCCTA CCCGGATGAT GTAGAATTTC TAACAAATAT GAACATAGGC
ATAAATGGAA AAGTTTACAT ACTGGCTCCT AACCAGGGAT ACATACTCAG TCTTAACAAT
AACATAAAAC CGATTGTCAC TTCTATCCAC AATACATCTT TATCCGAGGA AGAAGCCGCC
CCATGTCTTG TGTTCCCGAA CCCAACAACA GGAACGTTTA AAATCAATAT CACTGAGCCC
ATTGACTATG TACTGATCTA TGACATTAAC GGATTAAGTG AAAAGCATAC AACCGCTGAA
ATTGATACGC AATTAAGAGG TTTGCTGCTG ATAAAAATTG TTTTAAAAAA TGGCACAACT
CAAAACAGCA AAGTTATAAA AATGTAA
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| Protein sequence | MKKILFAVYV CLIVSICNGQ TVTGLDYTFN NSGYVEDKSG PVYIKHVVLT DGSIIQLGTI
FPNASQRFGY VNKLNANGSI NTDFNLPVSA YPNALSFRNN ENSYLTSIIT QTDGKIIVGG
MSEYNETIDG TTYSFSDIAL ARLLPDGSLD QAFGINGKLV LPFGKAQNKL TDIALSTTGE
IIIAGEYSDN TPMQTYVMRL TEDGSMDQSF GTNGLWTSSF MSNTFGTQIE MDIYDEVMVA
SNSGFDTVIV ARILINGTLD GTYGTNGFST INILEPIVGN RSQMRDMLID SNEDVFLGVV
MTGSNNLPPK ASVFKLNYTG SLVSSFGSNG HFEFAEGYHY AMAFTPENKI ISAVMRVDGL
PFFYTTTKDG QIDSSPEYDY TLASEFFSGL NAYVRLEDIT VLADGKIVAT GYTGSKSSSL
AQTGISIRLE KINPESATCA YQNKLVGFYR QLQDVCYDAQ GNFFATDLNR HIIKFNAAGT
VVKTWIRNTK NESENYPRIA SDNAGNIFSI AGNSINKFSN DGMLLISWGT LGAGNGQLNY
PGDIAIDSDQ NVYVLDVNNN RIQKFDNNGN YLLQWNSRES NTQLMAICID SDNNVYVSSA
YSHALHKFNS SGTFIQSFDL GTKYCESIDY NPINNLLYVI NYDLMTFSTS GVLQNTIETI
ASYDIPTHAI IKTVAVNKTN GSFAVTSIGD YNIHLFNSAN TLEKILGGYN RLEGNFGNAT
AFTADLNGNV YVANDRREIQ KFSAGNTYLL KWGGQGSADG KFNAVTDMAI SKNNIIYIVD
STNNSIQCFD LNGNFIRKWG TKGTSSGQFN QPYRIVIDPQ GFVYVFDKGN CRLQKFTSDG
TFVSTLTICV ANEMNPFEYA FYLMADSQSN IYFSVPNAGS VIRKINSSGF LVGSFSLLNA
SGDYQDLYNK ICLAGDHFYQ INTSNLLLSK FSLDGKFISA CDFTAAYPDD VEFLTNMNIG
INGKVYILAP NQGYILSLNN NIKPIVTSIH NTSLSEEEAA PCLVFPNPTT GTFKINITEP
IDYVLIYDIN GLSEKHTTAE IDTQLRGLLL IKIVLKNGTT QNSKVIKM
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