| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0420 |
|---|
| Symbol | |
|---|
| ID | 4185426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 490049 |
|---|
| End bp | 491797 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638070428 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677050 |
|---|
| Protein GI | 110636843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATC TGAAACTTAT TTTTACACTT GTGTTTGCGA TGCAATTCGC TTTAGTACAA
AGCCAGGATC TAAAATGGGC GGGCGATTTC GGTAGCAATG ATCAAAACTA TGTGAACTCC
CTTATCACCA AAGTTGCCGG CAATGGCGAC TACATTGTTA CAGGGATTTT ATATGGTACA
GTAGATTTTG ATTTTAGTTC GGGTGTTAAA AATCTAACAT CAGATCGAAA AAATGTTTTT
ATTGCCCGCT ATTCTTCAAC AGGAAGCTTT ATCTGGGTTA AATTATTAAA AGGAACCAGG
GGATTTTATG AATCTTCAAA TCCGACCATT AACATTGATA AGGATGATAA TATTATTCTG
GGCATGAGAT CGGATCATAC CGTTGACTTT GATCCTTCCG ATGCAGGTGA ATACAAATTG
CAAAGTGCAT ACAACGATAC GGAAGCAGCC TATTTAGCCA AATATGATGG GAATGGAAAT
TTTATCTGGG CCAAAAAATT CCAGGCAGAC AGAGGATTAT ACCCGAATTT TATTGAAACA
GATGCCGTTG ACGGAAGCAT TTATCTTGTT GGTGGCTATT ATTACACACA GGATTTTGAT
TTTGGCGCTG GTATTACTTC ACTATATGGA AGCAGTCAGA CAAACACTAT TTTTCTTGCC
AAATACAATC CAACAGGAGA CTTGATTTTT GCCAAAATCC TTATGAGCAC AAATGATGGT
GTTGGTATTA CAGCTATGAA AATGATAAAT AATTCAGAAT TTGTTTTTGC AGGCAATTTG
ATTGGTGCCA ATTTCAATCC AGGCGGCACA GCTGCATATT TTTATGTTGG AACAAATGGC
GGATATGTTG CTAAGTATAA AACAGACGGC ACATTTATTT GTGCCAATGC AATTTATATT
GAAAATTATA TTGGAGATAT TAGTGATGTA ACAACAGATC GTGACGGTAA TATGTATGTG
GTTGGAGATT TTTCAGGCTC CGTTGATTTT AATGGACGTA CAACTGAGGG GCAGGTAATT
GTGGCGAAAA GCTCCTATGA AACAGATGGT TTTGTAGTAA AATATAATGC TCAGGCAGAA
GTTGTATGGT ATTTCTCAAT AGGAAATACA GACTGGGATT CTTGCAATGG CATAGAAATA
GACAGTAAAA ATAATTTACT TATTGTAGGT CTTTTTACCG GAGAGGTTGA TTTTGATCCG
GTGCTTTCAA GTTACCAAAC ACTTGTAAAT CCTGCAGGCG CATCGGTATA TGCTGCATCG
TATACGCTTG ATAAGCAATA TATAAACGCT AAACAATTAG CATTTTCACC CAGCAATATG
GTTATGAGTC CGGGTATGAT CATAAAAGCA TCTGATGATT TTATGATAGG TGCTATTGCA
TATAATCCTA CAGATGTTGA TCCTTCTTCA AATGAAGTAC TTGTTCATAC ATTTCCATCA
GATTCAGGTC CCAGAGAATA TCTGTCGGTA TACAATTTGA ACACAACTCC GATAACTACA
TCAATCTTAA ATCAACAAAC AGCATCGTTT ACAGCATATC CCAATCCTGT GACCGGAGAC
GTACTTTACA TTACCAATGT GCCGGAAGAT ATACTTAACT CCAGACCTGT ACTTACTTCG
CTGGATGGAC GTACTATTTC GCTGGCGTAT ACACAAGATC AGGAAAAACT TACAATAGAC
TTGAATGGGT TAGCGAAAGG AGTATATTTT ATAACCATGG ATGGTCACTC CGTAAAAATA
ATCCGATAA
|
|---|
| Protein sequence | MKYLKLIFTL VFAMQFALVQ SQDLKWAGDF GSNDQNYVNS LITKVAGNGD YIVTGILYGT
VDFDFSSGVK NLTSDRKNVF IARYSSTGSF IWVKLLKGTR GFYESSNPTI NIDKDDNIIL
GMRSDHTVDF DPSDAGEYKL QSAYNDTEAA YLAKYDGNGN FIWAKKFQAD RGLYPNFIET
DAVDGSIYLV GGYYYTQDFD FGAGITSLYG SSQTNTIFLA KYNPTGDLIF AKILMSTNDG
VGITAMKMIN NSEFVFAGNL IGANFNPGGT AAYFYVGTNG GYVAKYKTDG TFICANAIYI
ENYIGDISDV TTDRDGNMYV VGDFSGSVDF NGRTTEGQVI VAKSSYETDG FVVKYNAQAE
VVWYFSIGNT DWDSCNGIEI DSKNNLLIVG LFTGEVDFDP VLSSYQTLVN PAGASVYAAS
YTLDKQYINA KQLAFSPSNM VMSPGMIIKA SDDFMIGAIA YNPTDVDPSS NEVLVHTFPS
DSGPREYLSV YNLNTTPITT SILNQQTASF TAYPNPVTGD VLYITNVPED ILNSRPVLTS
LDGRTISLAY TQDQEKLTID LNGLAKGVYF ITMDGHSVKI IR
|
|---|
| |